RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TCRBP04435 133 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 SERPINE2P07093 398 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 OR5AC1P0C628 307 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 EGR2P11161 476 aaPredicted RBP12.64□□□□□ -0.39
BRK1-201ENST00000530758 MAS1LP35410 378 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 PJVKQ0ZLH3 352 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 PLGLAQ15195 96 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 SP6Q3SY56 376 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 FOXRED2Q8IWF2 684 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 CENPSQ8N2Z9 138 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 DUSP18Q8NEJ0 188 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 TMEM56Q96MV1 263 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 TSC22D3Q99576 134 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 NUBP2Q9Y5Y2 271 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 TMEM56-RWDD3S4R434 201 aa12.64□□□□□ -0.39
BRK1-201ENST00000530758 UPK2O00526 184 aa12.63□□□□□ -0.39
BRK1-201ENST00000530758 ARPC1BO15143 372 aaKnown RBP12.63□□□□□ -0.39
BRK1-201ENST00000530758 AKR1C4P17516 323 aa12.63□□□□□ -0.39
BRK1-201ENST00000530758 MECP2P51608 486 aaKnown RBP12.63□□□□□ -0.39
BRK1-201ENST00000530758 TMEM187Q14656 261 aa12.63□□□□□ -0.39
BRK1-201ENST00000530758 TMEM95Q3KNT9 176 aa12.63□□□□□ -0.39
BRK1-201ENST00000530758 C19orf54Q5BKX5 351 aa12.63□□□□□ -0.39
BRK1-201ENST00000530758 STPG2Q8N412 459 aa12.63□□□□□ -0.39
BRK1-201ENST00000530758 CHPT1Q8WUD6 406 aa12.63□□□□□ -0.39
BRK1-201ENST00000530758 IL22RA2Q969J5 263 aa12.63□□□□□ -0.39
BRK1-201ENST00000530758 ZNF430Q9H8G1 570 aaPredicted RBP12.63□□□□□ -0.39
BRK1-201ENST00000530758 FAM240BA0A1B0GVZ2 78 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 ATG12O94817 140 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 KRASP01116 189 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 P0C879 139 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 NDPQ00604 133 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 CFHR3Q02985 330 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 FXYD3Q14802 87 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 TMED4Q7Z7H5 227 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 LRTM2Q8N967 370 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 DMBX1Q8NFW5 382 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 SGMS2Q8NHU3 365 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 TMEM68Q96MH6 324 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 CLCC1Q96S66 551 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 ZNF747Q9BV97 191 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 GON7Q9BXV9 100 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 PALMDQ9NP74 551 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 TMEM140Q9NV12 185 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 FLVCR2Q9UPI3 526 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 NBEAL1Q6ZS30 2694 aa12.62□□□□□ -0.39
BRK1-201ENST00000530758 TET2Q6N021 2002 aaPredicted RBP12.61□□□□□ -0.39
BRK1-201ENST00000530758 PIGBOS1A0A0B4J2F0 54 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 ATP6V0E1O15342 81 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 IGKV1-5P01602 117 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 ANXA3P12429 323 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 PPIFP30405 207 aaKnown RBP12.61□□□□□ -0.39
BRK1-201ENST00000530758 G6PCP35575 357 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 DEFA1P59665 94 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 DEFA3P59666 94 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 ERVK-16P61578 105 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 RPL8P62917 257 aaKnown RBP12.61□□□□□ -0.39
BRK1-201ENST00000530758 AKIRIN2Q53H80 203 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 ARSJQ5FYB0 599 aaPredicted RBP12.61□□□□□ -0.39
BRK1-201ENST00000530758 C12orf54Q6X4T0 127 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 SSX9Q7RTT3 188 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
BRK1-201ENST00000530758 LHFPL5Q8TAF8 219 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 WFDC12Q8WWY7 111 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 NOL4LQ96MY1 436 aaPredicted RBP12.61□□□□□ -0.39
BRK1-201ENST00000530758 C20orf85Q9H1P6 137 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 FBXO7Q9Y3I1 522 aa12.61□□□□□ -0.39
BRK1-201ENST00000530758 TRAV3A0A0B4J244 114 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 SFT2D2O95562 160 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 KRTAP10-3P60369 221 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 SRPXP78539 464 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
BRK1-201ENST00000530758 PPP1R1AQ13522 171 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 CENPVQ7Z7K6 275 aaPredicted RBP12.6□□□□□ -0.39
BRK1-201ENST00000530758 FAM219AQ8IW50 185 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 KLHDC1Q8N7A1 406 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 MINDY2Q8NBR6 621 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 ARPC1AQ92747 370 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
BRK1-201ENST00000530758 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
BRK1-201ENST00000530758 CITED1Q99966 193 aa12.6□□□□□ -0.39
BRK1-201ENST00000530758 HAX1O00165 279 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 CNIH1O95406 144 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 OR4E1P0C645 316 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 HLA-GP17693 338 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 TNXAQ16473 311 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 TRIM16LQ309B1 348 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 H2BFWTQ7Z2G1 175 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 NRARPQ7Z6K4 114 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 COMMD1Q8N668 190 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 RNF152Q8N8N0 203 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 PARP11Q9NR21 331 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 FKBP11Q9NYL4 201 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 LINC00527Q9UJ94 153 aa12.59□□□□□ -0.39
BRK1-201ENST00000530758 TRAV41A0A0B4J266 112 aa12.58□□□□□ -0.4
BRK1-201ENST00000530758 A0A0B4J2A0 478 aa12.58□□□□□ -0.4
BRK1-201ENST00000530758 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
BRK1-201ENST00000530758 C9orf170A2RU37 121 aa12.58□□□□□ -0.4
BRK1-201ENST00000530758 PSMB11A5LHX3 300 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms