RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CYP2G1PQ6ZSU1 146 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 SLC25A48Q6ZT89 311 aaKnown RBP12.63□□□□□ -0.39
USH1C-207ENST00000527720 WFDC8Q8IUA0 241 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 LYG1Q8N1E2 194 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 FAM216BQ8N7L0 139 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 Q8NA96 180 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 LEAP2Q969E1 77 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 C12orf57Q99622 126 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 TMEM14BQ9NUH8 114 aa12.63□□□□□ -0.39
USH1C-207ENST00000527720 TRAV3A0A0B4J244 114 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 TRAV38-1A0A0B4J264 116 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 SMCO3A2RU48 225 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 KBTBD11O94819 623 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 MEOX2P50222 304 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 ERVFRD-1P60508 538 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 MEF2CQ06413 473 aaPredicted RBP12.62□□□□□ -0.39
USH1C-207ENST00000527720 CISD2Q8N5K1 135 aaKnown RBP12.62□□□□□ -0.39
USH1C-207ENST00000527720 A0A1W2PPE3 182 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 AP4M1O00189 453 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 RRHO14718 337 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 ATXN7O15265 892 aaPredicted RBP12.62□□□□□ -0.39
USH1C-207ENST00000527720 EIF3GO75821 320 aaKnown RBP eCLIP12.62□□□□□ -0.39
USH1C-207ENST00000527720 OR4A8P0C604 315 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 HSPE1P61604 102 aaKnown RBP12.62□□□□□ -0.39
USH1C-207ENST00000527720 UTF1Q5T230 341 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 OR4A47Q6IF82 309 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 TREML4Q6UXN2 200 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 ZNF383Q8NA42 475 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 OR13D1Q8NGV5 346 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 SMIM7Q9BQ49 75 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 TCEAL7Q9BRU2 100 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 TMPRSS5Q9H3S3 457 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 KCNIP2Q9NS61 270 aa12.62□□□□□ -0.39
USH1C-207ENST00000527720 VSTM5A8MXK1 200 aa12.61□□□□□ -0.39
USH1C-207ENST00000527720 TGOLN2O43493 480 aa12.61□□□□□ -0.39
USH1C-207ENST00000527720 THBDP07204 575 aa12.61□□□□□ -0.39
USH1C-207ENST00000527720 FABP9Q0Z7S8 132 aa12.61□□□□□ -0.39
USH1C-207ENST00000527720 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
USH1C-207ENST00000527720 ZNF343Q6P1L6 599 aa12.61□□□□□ -0.39
USH1C-207ENST00000527720 C1orf87Q8N0U7 546 aa12.61□□□□□ -0.39
USH1C-207ENST00000527720 GAL3ST2Q9H3Q3 398 aa12.61□□□□□ -0.39
USH1C-207ENST00000527720 CXCL1P09341 107 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 CCL8P80075 99 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 BSPH1Q075Z2 132 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 MGAQ8IWI9 3026 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 CEP250Q9BV73 2442 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 HMGB3O15347 200 aaKnown RBP12.6□□□□□ -0.39
USH1C-207ENST00000527720 OPN1MWP04001 364 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 IL6RP08887 468 aaPredicted RBP12.6□□□□□ -0.39
USH1C-207ENST00000527720 OPN1MW2P0DN77 364 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 OPN1MW3P0DN78 364 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 ZCCHC14Q8WYQ9 949 aaKnown RBP12.6□□□□□ -0.39
USH1C-207ENST00000527720 NPVFQ9HCQ7 196 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 ENY2Q9NPA8 101 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 PRNDQ9UKY0 176 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 ZNF257Q9Y2Q1 563 aa12.6□□□□□ -0.39
USH1C-207ENST00000527720 ZFHX2Q9C0A1 2572 aaPredicted RBP12.6□□□□□ -0.39
USH1C-207ENST00000527720 FNDC10F2Z333 226 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 TMPRSS2O15393 492 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 RTL8BQ17RB0 113 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 ABHD12Q8N2K0 398 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 TMEM170AQ8WVE7 144 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 SLC25A10Q9UBX3 287 aaPredicted RBP12.59□□□□□ -0.39
USH1C-207ENST00000527720 URGCP-MRPS24S4R325 110 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 RP1L1Q8IWN7 2480 aaPredicted RBP12.59□□□□□ -0.39
USH1C-207ENST00000527720 TGIF2-C20orf24A0A0A6YYL0 155 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 A0A1W2PPV4 95 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 SMIM6P0DI80 62 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 NDUFB7P17568 137 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 NPY1RP25929 384 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 GNG10P50151 68 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 TBR1Q16650 682 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 TGIF2LYQ8IUE0 185 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 SPACA3Q8IXA5 215 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 SLC24A4Q8NFF2 622 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 OR4F5Q8NH21 305 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 NEIL1Q96FI4 390 aaPredicted RBP12.59□□□□□ -0.39
USH1C-207ENST00000527720 OR4F4Q96R69 305 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 MS4A5Q9H3V2 200 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 NGBQ9NPG2 151 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 LSM4Q9Y4Z0 139 aaKnown RBP12.59□□□□□ -0.39
USH1C-207ENST00000527720 ACACAQ13085 2346 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 GVINP1Q7Z2Y8 2422 aa12.59□□□□□ -0.39
USH1C-207ENST00000527720 TRBV24-1A0A075B6N3 115 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 KIAA0141Q14154 515 aaPredicted RBP12.58□□□□□ -0.4
USH1C-207ENST00000527720 ZNF674Q2M3X9 581 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 MGST2Q99735 147 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 TXNDC17Q9BRA2 123 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 GGTLC1Q9BX51 225 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 PARLQ9H300 379 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 SAP30LQ9HAJ7 183 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 DCAF16Q9NXF7 216 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 PPIAL4EA0A075B759 164 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 PPIAL4DF5H284 164 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 PAGE4O60829 102 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 MMP23AO75900 390 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 CT45A6P0DMU7 189 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 CT45A5P0DMU8 189 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 CT45A7P0DMV0 189 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 PPIAL4FP0DN26 164 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms