RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ZNF230Q9UIE0 474 aaPredicted RBP2.62□□□□□ -1.99
SKP1-208ENST00000521216 CEP170Q5SW79 1584 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 RIMBP3CA6NJZ7 1639 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 RIMBP3BA6NNM3 1639 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 KIAA0556O60303 1618 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 PHRF1Q9P1Y6 1649 aaKnown RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 TANC1Q9C0D5 1861 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 MYOM1P52179 1685 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 IGKV1-27A0A075B6S5 117 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 IGHV2OR16-5A0A0B4J2B6 119 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 IGHV1-3A0A0C4DH29 117 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 EXOC1LA0A1B0GW35 172 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 TCRBV3S1A0A5B6 114 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 IFITM5A6NNB3 132 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 C15orf65H3BRN8 121 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 MFSD11O43934 449 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 OR7C2O60412 319 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 SLC19A2O60779 497 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 SCELO95171 688 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 RAB36O95755 333 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 IFNA1P01562 189 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 SERPINA7P05543 415 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 UBBP0CG47 229 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 MPC1LP0DKB6 136 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 C8orf88P0DMB2 117 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 HIST1H1CP16403 213 aaKnown RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 FABP6P51161 128 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 UBE2E1P51965 193 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 CLDN12P56749 244 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 TAS2R43P59537 309 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 RPS15AP62244 130 aaKnown RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 UBA52P62987 128 aaKnown RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 LCN2P80188 198 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 TNXAQ16473 311 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 TMEM128Q5BJH2 165 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 OPN5Q6U736 354 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 DOLPP1Q86YN1 238 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 C20orf196Q8IYI0 205 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 ZNF101Q8IZC7 436 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 DEFB107AQ8IZN7 70 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 HIST3H2BBQ8N257 126 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 SPANXA2-OT1Q8N9U9 137 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 LFNGQ8NES3 379 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 TSTD1Q8NFU3 115 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 OR4D11Q8NGI4 311 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 OR1P1Q8NH06 330 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 GPR119Q8TDV5 335 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 POP5Q969H6 163 aaKnown RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 ARL11Q969Q4 196 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 GPR82Q96P67 336 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 IP6K3Q96PC2 410 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 MIEN1Q9BRT3 115 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 PSMG3Q9BT73 122 aaPredicted RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 FAAP24Q9BTP7 215 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 CHCHD7Q9BUK0 85 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 NUDT9Q9BW91 350 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 OR2J1Q9GZK6 312 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 PRO1933Q9H354 126 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 PLEKHA1Q9HB21 404 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 SPANXB1Q9NS25 103 aaPredicted RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 COMMD3Q9UBI1 195 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 NAT8Q9UHE5 227 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 NXT1Q9UKK6 140 aaKnown RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 RAB22AQ9UL26 194 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 MCTS1Q9ULC4 181 aaKnown RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 C14orf166Q9Y224 244 aaKnown RBP2.61□□□□□ -1.99
SKP1-208ENST00000521216 TPRKBQ9Y3C4 175 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 ARHGAP5Q13017 1502 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 MYH10P35580 1976 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 PTPRJQ12913 1337 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 LTN1O94822 1766 aa2.61□□□□□ -1.99
SKP1-208ENST00000521216 SHPRHQ149N8 1683 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 PREX1Q8TCU6 1659 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 ANKRD36CQ5JPF3 1778 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 SCN11AQ9UI33 1791 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 BORCS7-ASMTA0A0B4J1R7 106 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 ANKRD20A5PA0PJZ0 165 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 TVP23AA6NH52 213 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 SLC22A20A6NK97 555 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 CEACAM18A8MTB9 384 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 INMT-MINDY4F8WBC2 141 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 G3V3Q6 166 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 MANBAO00462 879 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 TAAR5O14804 337 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 CNIH1O95406 144 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 CFDP00746 253 aaPredicted RBP2.6□□□□□ -1.99
SKP1-208ENST00000521216 HLA-AP01891 365 aaKnown RBP2.6□□□□□ -1.99
SKP1-208ENST00000521216 HBZP02008 142 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 PMP2P02689 132 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 ORM1P02763 201 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 OPN1SWP03999 348 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 OR4Q2P0C623 313 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 SULT1A3P0DMM9 295 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 SULT1A4P0DMN0 295 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 GZMBP10144 247 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 ESDP10768 282 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 GABRG2P18507 467 aa2.6□□□□□ -1.99
SKP1-208ENST00000521216 HIST1H1TP22492 207 aaPredicted RBP2.6□□□□□ -1.99
SKP1-208ENST00000521216 NFYAP23511 347 aaPredicted RBP2.6□□□□□ -1.99
SKP1-208ENST00000521216 IMPA1P29218 277 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms