RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 FLVCR2Q9UPI3 526 aa10.13□□□□□ -0.79
TCOF1-210ENST00000506767 KCNIP3Q9Y2W7 256 aa10.13□□□□□ -0.79
TCOF1-210ENST00000506767 ARPC1BO15143 372 aaKnown RBP10.12□□□□□ -0.79
TCOF1-210ENST00000506767 KRASP01116 189 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 FGF2P09038 288 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 EGR2P11161 476 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-210ENST00000506767 G6PCP35575 357 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 UBE2MP61081 183 aaKnown RBP10.12□□□□□ -0.79
TCOF1-210ENST00000506767 NDPQ00604 133 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 TMEM187Q14656 261 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 ARSJQ5FYB0 599 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-210ENST00000506767 SSX9Q7RTT3 188 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 TMED4Q7Z7H5 227 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 MMD2Q8IY49 270 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 TMEM56Q96MV1 263 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 ZNF430Q9H8G1 570 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-210ENST00000506767 TMEM140Q9NV12 185 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 TMEM56-RWDD3S4R434 201 aa10.12□□□□□ -0.79
TCOF1-210ENST00000506767 STAB1Q9NY15 2570 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 FAM240BA0A1B0GVZ2 78 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 AP4M1O00189 453 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 UPK2O00526 184 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 ATP6V0E1O15342 81 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 CREBL2O60519 120 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-210ENST00000506767 P0C879 139 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 MAS1LP35410 378 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 MECP2P51608 486 aaKnown RBP10.11□□□□□ -0.79
TCOF1-210ENST00000506767 ERVK-16P61578 105 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 FXYD3Q14802 87 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 C19orf54Q5BKX5 351 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 FOXRED2Q8IWF2 684 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 SELENOHQ8IZQ5 122 aaKnown RBP10.11□□□□□ -0.79
TCOF1-210ENST00000506767 STPG2Q8N412 459 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 DUSP18Q8NEJ0 188 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 DMBX1Q8NFW5 382 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 LHFPL5Q8TAF8 219 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 WFDC12Q8WWY7 111 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 NOL4LQ96MY1 436 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-210ENST00000506767 ALX4Q9H161 411 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-210ENST00000506767 C20orf85Q9H1P6 137 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 FBXO7Q9Y3I1 522 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 NUBP2Q9Y5Y2 271 aa10.11□□□□□ -0.79
TCOF1-210ENST00000506767 TRAV3A0A0B4J244 114 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 SFT2D2O95562 160 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 IGKV1-5P01602 117 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 OR9G9P0C7N8 305 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 DEFA1P59665 94 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 DEFA3P59666 94 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 KRTAP10-3P60369 221 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 CFHR3Q02985 330 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 PPP1R1AQ13522 171 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 TRIM16LQ309B1 348 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 KLHDC1Q8N7A1 406 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 SGMS2Q8NHU3 365 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 CHPT1Q8WUD6 406 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 ARPC1AQ92747 370 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 IL22RA2Q969J5 263 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 PALMDQ9NP74 551 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 LINC00527Q9UJ94 153 aa10.1□□□□□ -0.79
TCOF1-210ENST00000506767 PLXNB1O43157 2135 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 HAX1O00165 279 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 ATG12O94817 140 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 OR4E1P0C645 316 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 ANXA3P12429 323 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 ANXA7P20073 488 aaKnown RBP10.09□□□□□ -0.79
TCOF1-210ENST00000506767 PPIFP30405 207 aaKnown RBP10.09□□□□□ -0.79
TCOF1-210ENST00000506767 RPL8P62917 257 aaKnown RBP10.09□□□□□ -0.79
TCOF1-210ENST00000506767 TNXAQ16473 311 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 AKIRIN2Q53H80 203 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 C12orf54Q6X4T0 127 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 NRARPQ7Z6K4 114 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 LRTM2Q8N967 370 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 RBPMSQ93062 196 aaKnown RBP10.09□□□□□ -0.79
TCOF1-210ENST00000506767 FAM103A1Q9BTL3 118 aaKnown RBP10.09□□□□□ -0.79
TCOF1-210ENST00000506767 ZNF747Q9BV97 191 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 GON7Q9BXV9 100 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 PARP11Q9NR21 331 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 NUDT15Q9NV35 164 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 PRR13Q9NZ81 148 aa10.09□□□□□ -0.79
TCOF1-210ENST00000506767 TRAV6A0A075B6T7 132 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 TRAV41A0A0B4J266 112 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 C9orf170A2RU37 121 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 E7EUB6 86 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 G3V318 75 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 CNIH1O95406 144 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 HLA-GP17693 338 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 VAMP1P23763 118 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 GNB1P62873 340 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 SRPXP78539 464 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 ANKRD55Q3KP44 614 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 ASPHD1Q5U4P2 390 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 TMEM268Q5VZI3 342 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 C10orf99Q6UWK7 81 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 H2BFWTQ7Z2G1 175 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 CENPVQ7Z7K6 275 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-210ENST00000506767 ZNF695Q8IW36 515 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 FAM219AQ8IW50 185 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 LGI3Q8N145 548 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 MINDY2Q8NBR6 621 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 ENKURQ8TC29 256 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms