RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 RPA2P15927 270 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 MDKP21741 143 aaPredicted RBP7.93□□□□□ -1.14
NUP54-203ENST00000504173 VAMP1P23763 118 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 UCP1P25874 307 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 DHODHQ02127 395 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 TMEM95Q3KNT9 176 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 TMEM128Q5BJH2 165 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 SLC25A42Q86VD7 318 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 PPP1R27Q86WC6 154 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 Q8N2B8 174 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 OR2A7Q96R45 310 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 HSPB9Q9BQS6 159 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 BEX1Q9HBH7 125 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 RYR2Q92736 4967 aa7.93□□□□□ -1.14
NUP54-203ENST00000504173 TRAV6A0A075B6T7 132 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 IGHV7-81A0A0B4J1V7 117 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 A0A1B0GUS0 222 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 CLPSL1A2RUU4 121 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 MARCH11A6NNE9 402 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 FCN1O00602 326 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 ATG12O94817 140 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 KRASP01116 189 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 IGHG2P01859 326 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 ANXA3P12429 323 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 ANXA7P20073 488 aaKnown RBP7.92□□□□□ -1.14
NUP54-203ENST00000504173 G6PCP35575 357 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 AKR1C2P52895 323 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 UBE2MP61081 183 aaKnown RBP7.92□□□□□ -1.14
NUP54-203ENST00000504173 GNB1P62873 340 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 PPP1R1AQ13522 171 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 POU2AF1Q16633 256 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 OR4A47Q6IF82 309 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 ZNF695Q8IW36 515 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 FOXRED2Q8IWF2 684 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 PUSL1Q8N0Z8 303 aaKnown RBP7.92□□□□□ -1.14
NUP54-203ENST00000504173 LINC01006Q8NI28 216 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 RNASE11Q8TAA1 199 aaKnown RBP7.92□□□□□ -1.14
NUP54-203ENST00000504173 ABHD5Q8WTS1 349 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 GLYATL2Q8WU03 294 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 GALNT14Q96FL9 552 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 TMEM222Q9H0R3 208 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 PALMDQ9NP74 551 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 PARP11Q9NR21 331 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 TMEM140Q9NV12 185 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 NUDT15Q9NV35 164 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 BET1LQ9NYM9 111 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 RNF114Q9Y508 228 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 NUBP2Q9Y5Y2 271 aa7.92□□□□□ -1.14
NUP54-203ENST00000504173 AP4M1O00189 453 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 ATP6V0E1O15342 81 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 ACTL6BO94805 426 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 KBTBD11O94819 623 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 CNIH1O95406 144 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 SFT2D2O95562 160 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 IGKV1-39P01597 117 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 IGKV1D-39P04432 117 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 H2AFB2P0C5Z0 115 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 SUPT4H1P63272 117 aaKnown RBP7.91□□□□□ -1.14
NUP54-203ENST00000504173 CX3CL1P78423 397 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 SRPXP78539 464 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 NDPQ00604 133 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 PJVKQ0ZLH3 352 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 TMEM187Q14656 261 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 FXYD3Q14802 87 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 TNXAQ16473 311 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 PRSS8Q16651 343 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 C4orf46Q504U0 113 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 H2BFWTQ7Z2G1 175 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 NRARPQ7Z6K4 114 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 MMD2Q8IY49 270 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 OR4A5Q8NH83 315 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 TMEM167AQ8TBQ9 72 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 CASTOR1Q8WTX7 329 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 RBPMSQ93062 196 aaKnown RBP7.91□□□□□ -1.14
NUP54-203ENST00000504173 OR51J1Q9H342 316 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 ZNF430Q9H8G1 570 aaPredicted RBP7.91□□□□□ -1.14
NUP54-203ENST00000504173 SERTAD4Q9NUC0 356 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 PRR13Q9NZ81 148 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 MMP24Q9Y5R2 645 aa7.91□□□□□ -1.14
NUP54-203ENST00000504173 C9orf170A2RU37 121 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 LINC01548A6NM66 108 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 UPK2O00526 184 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 SNAPC5O75971 98 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 CDS2O95674 445 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 HLA-AP01891 365 aaKnown RBP7.9□□□□□ -1.14
NUP54-203ENST00000504173 OR4E1P0C645 316 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 RAB25P57735 213 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 RPL8P62917 257 aaKnown RBP7.9□□□□□ -1.14
NUP54-203ENST00000504173 DCTN2Q13561 401 aaKnown RBP7.9□□□□□ -1.14
NUP54-203ENST00000504173 MRGPRG-AS1Q2M3A8 158 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 TMEM268Q5VZI3 342 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 PLET1Q6UQ28 207 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 ZNF562Q6V9R5 426 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 SELENOHQ8IZQ5 122 aaKnown RBP7.9□□□□□ -1.14
NUP54-203ENST00000504173 LGI3Q8N145 548 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 KLHDC1Q8N7A1 406 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 DUSP18Q8NEJ0 188 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 GRPEL2Q8TAA5 225 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 LHFPL5Q8TAF8 219 aa7.9□□□□□ -1.14
NUP54-203ENST00000504173 ARPC1AQ92747 370 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms