RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CHRNA7P36544 502 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 ECI1P42126 302 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 PIGPP57054 158 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 RPL23AP62750 156 aaKnown RBP10.59□□□□□ -0.71
COL1A1-208ENST00000494334 TNXAQ16473 311 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 BAK1Q16611 211 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 POU2AF1Q16633 256 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 KHDC1LQ5JSQ8 128 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 OR4A47Q6IF82 309 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 UNQ5815/PRO19632Q6UWF5 114 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 MMD2Q8IY49 270 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 GDPD1Q8N9F7 314 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 TMEM167AQ8TBQ9 72 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 PRRT1Q99946 306 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 BATF3Q9NR55 127 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 ZFP57Q9NU63 452 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 MCUBQ9NWR8 336 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 SLC2A8Q9NY64 477 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 BET1LQ9NYM9 111 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 COMMD9Q9P000 198 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 GPR132Q9UNW8 380 aa10.59□□□□□ -0.71
COL1A1-208ENST00000494334 TET2Q6N021 2002 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-208ENST00000494334 MSGN1A6NI15 193 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 CREBL2O60519 120 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-208ENST00000494334 AP3S2P59780 193 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 SURF2Q15527 256 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-208ENST00000494334 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-208ENST00000494334 ASPHD1Q5U4P2 390 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 TREML4Q6UXN2 200 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 C18orf65Q6ZTR6 163 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 FAM110DQ8TAY7 271 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-208ENST00000494334 SRSF12Q8WXF0 261 aaKnown RBP10.58□□□□□ -0.72
COL1A1-208ENST00000494334 R3HDM4Q96D70 268 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 RTBDNQ9BSG5 229 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-208ENST00000494334 KLK15Q9H2R5 256 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 C5orf66Q9H5L9 145 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 FAM212BQ9NTI7 297 aaPredicted RBP10.58□□□□□ -0.72
COL1A1-208ENST00000494334 COPZ2Q9P299 210 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 SCP2D1Q9UJQ7 156 aa10.58□□□□□ -0.72
COL1A1-208ENST00000494334 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 MARCH11A6NNE9 402 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 UPK2O00526 184 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 ACTL6BO94805 426 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 PF4V1P10720 104 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 RPA2P15927 270 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 FAUP35544 74 aaKnown RBP10.57□□□□□ -0.72
COL1A1-208ENST00000494334 RAB9AP51151 201 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 ZNF45Q02386 682 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 KIAA0141Q14154 515 aaPredicted RBP10.57□□□□□ -0.72
COL1A1-208ENST00000494334 C10orf55Q5SWW7 151 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 DMBX1Q8NFW5 382 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 OR4F17Q8NGA8 305 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 OR4A5Q8NH83 315 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 DEDD2Q8WXF8 326 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 TMEM68Q96MH6 324 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 OR4F4Q96R69 305 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 TMEM140Q9NV12 185 aa10.57□□□□□ -0.72
COL1A1-208ENST00000494334 FOXA2Q9Y261 457 aaPredicted RBP10.57□□□□□ -0.72
COL1A1-208ENST00000494334 C3orf85A0A1B0GTC6 90 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 E7EUB6 86 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 H0Y980 276 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 KRASP01116 189 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 IGKV1-39P01597 117 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 IGKV1D-39P04432 117 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 MAS1LP35410 378 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 G6PCP35575 357 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 CDX1P47902 265 aaPredicted RBP10.56□□□□□ -0.72
COL1A1-208ENST00000494334 RPL8P62917 257 aaKnown RBP10.56□□□□□ -0.72
COL1A1-208ENST00000494334 ZNF57Q68EA5 555 aaPredicted RBP10.56□□□□□ -0.72
COL1A1-208ENST00000494334 TMEM65Q6PI78 240 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 LINC00299Q6ZSB3 139 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 CCDC71LQ8N9Z2 235 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 OR5T1Q8NG75 326 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 OR5M8Q8NGP6 311 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 MYOZ3Q8TDC0 251 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 CASTOR1Q8WTX7 329 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 TP53RKQ96S44 253 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 PHB2Q99623 299 aa10.56□□□□□ -0.72
COL1A1-208ENST00000494334 C14orf166Q9Y224 244 aaKnown RBP10.56□□□□□ -0.72
COL1A1-208ENST00000494334 APELAP0DMC3 54 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 MYOD1P15172 320 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 HLA-GP17693 338 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 RPL27AP46776 148 aaKnown RBP10.55□□□□□ -0.72
COL1A1-208ENST00000494334 ERVK-16P61578 105 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 SP6Q3SY56 376 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 TRIQKQ629K1 86 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 C8orf86Q6ZUL3 223 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 ZNF695Q8IW36 515 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 CADM3Q8N126 398 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 ZNF491Q8N8L2 437 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 KLHL30-AS1Q8NEE0 82 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 SEC22AQ96IW7 307 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 MS4A10Q96PG2 267 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 SCGB3A2Q96PL1 93 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 SPIN2AQ99865 258 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 SPIN2BQ9BPZ2 258 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 AKIP1Q9NQ31 210 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 PTTG2Q9NZH5 202 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 VSIG4Q9Y279 399 aa10.55□□□□□ -0.72
COL1A1-208ENST00000494334 TNCP24821 2201 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms