RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 SERPINE2P07093 398 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 OR5AC1P0C628 307 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 PROK1P58294 105 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 PJVKQ0ZLH3 352 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 ASAH1Q13510 395 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 MRGPRG-AS1Q2M3A8 158 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 OR4A47Q6IF82 309 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 MZT2BQ6NZ67 158 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 ZNF562Q6V9R5 426 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 PUSL1Q8N0Z8 303 aaKnown RBP8.42□□□□□ -1.06
TOP3B-216ENST00000487485 DMBX1Q8NFW5 382 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 VSTM2AQ8TAG5 236 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 FAM110DQ8TAY7 271 aaPredicted RBP8.42□□□□□ -1.06
TOP3B-216ENST00000487485 OR51J1Q9H342 316 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 COMMD9Q9P000 198 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 LINC00527Q9UJ94 153 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 FLVCR2Q9UPI3 526 aa8.42□□□□□ -1.06
TOP3B-216ENST00000487485 MARCH11A6NNE9 402 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 AP4M1O00189 453 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 KBTBD11O94819 623 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 CNIH1O95406 144 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 IGKV1-39P01597 117 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 IGKV1D-39P04432 117 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 IL6RP08887 468 aaPredicted RBP8.41□□□□□ -1.06
TOP3B-216ENST00000487485 RPA2P15927 270 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 UCP1P25874 307 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 SLC6A1P30531 599 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 G6PCP35575 357 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 ERVK-16P61578 105 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 GNB1P62873 340 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 CX3CL1P78423 397 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 DHODHQ02127 395 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 POU2AF1Q16633 256 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 TRIM16LQ309B1 348 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 TMEM128Q5BJH2 165 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 CENPVQ7Z7K6 275 aaPredicted RBP8.41□□□□□ -1.06
TOP3B-216ENST00000487485 CENPSQ8N2Z9 138 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 KLHDC1Q8N7A1 406 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 TMEM167AQ8TBQ9 72 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 GLYATL2Q8WU03 294 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 NOL4LQ96MY1 436 aaPredicted RBP8.41□□□□□ -1.06
TOP3B-216ENST00000487485 WNT10AQ9GZT5 417 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 TMEM222Q9H0R3 208 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 PARP11Q9NR21 331 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 BET1LQ9NYM9 111 aa8.41□□□□□ -1.06
TOP3B-216ENST00000487485 FAM240BA0A1B0GVZ2 78 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 UPK2O00526 184 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 ARPC1BO15143 372 aaKnown RBP8.4□□□□□ -1.06
TOP3B-216ENST00000487485 ATP6V0E1O15342 81 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 CREBL2O60519 120 aaPredicted RBP8.4□□□□□ -1.06
TOP3B-216ENST00000487485 CDS2O95674 445 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 PRB2P02812 416 aaPredicted RBP8.4□□□□□ -1.06
TOP3B-216ENST00000487485 TCRBP04435 133 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 IGF1P05019 195 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 SUPT4H1P63272 117 aaKnown RBP8.4□□□□□ -1.06
TOP3B-216ENST00000487485 NDPQ00604 133 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 FXYD3Q14802 87 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 TNXAQ16473 311 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 PRSS8Q16651 343 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 SLC25A42Q86VD7 318 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 MMD2Q8IY49 270 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 STPG2Q8N412 459 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 OR4A5Q8NH83 315 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 ABHD5Q8WTS1 349 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 CHPT1Q8WUD6 406 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 GALNT14Q96FL9 552 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 SEC22AQ96IW7 307 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 FAM103A1Q9BTL3 118 aaKnown RBP8.4□□□□□ -1.06
TOP3B-216ENST00000487485 ZNF430Q9H8G1 570 aaPredicted RBP8.4□□□□□ -1.06
TOP3B-216ENST00000487485 TMEM140Q9NV12 185 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 FBXO7Q9Y3I1 522 aa8.4□□□□□ -1.06
TOP3B-216ENST00000487485 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 DNAH3Q8TD57 4116 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 TRAV3A0A0B4J244 114 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 G3V4G9 280 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 ACTL6BO94805 426 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 ATG12O94817 140 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 EGR2P11161 476 aaPredicted RBP8.39□□□□□ -1.07
TOP3B-216ENST00000487485 ANXA3P12429 323 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 VAMP1P23763 118 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 MAS1LP35410 378 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 DEFA1P59665 94 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 DEFA3P59666 94 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 RPL8P62917 257 aaKnown RBP8.39□□□□□ -1.07
TOP3B-216ENST00000487485 SSBP2P81877 361 aaPredicted RBP8.39□□□□□ -1.07
TOP3B-216ENST00000487485 PPP1R1AQ13522 171 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 TMEM187Q14656 261 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 H2BFWTQ7Z2G1 175 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 ZNF695Q8IW36 515 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 CADM3Q8N126 398 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 LHFPL5Q8TAF8 219 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 ARPC1AQ92747 370 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 TMEM56Q96MV1 263 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 C20orf85Q9H1P6 137 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 NUBP2Q9Y5Y2 271 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 WSB1Q9Y6I7 421 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 TMEM56-RWDD3S4R434 201 aa8.39□□□□□ -1.07
TOP3B-216ENST00000487485 TET2Q6N021 2002 aaPredicted RBP8.39□□□□□ -1.07
TOP3B-216ENST00000487485 TRAV6A0A075B6T7 132 aa8.38□□□□□ -1.07
TOP3B-216ENST00000487485 TRAV41A0A0B4J266 112 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms