RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
LINC00996-201ENST00000477392 FOXA2Q9Y261 457 aaPredicted RBP12.85□□□□□ -0.35
LINC00996-201ENST00000477392 PPIAL4AQ9Y536 164 aa12.85□□□□□ -0.35
LINC00996-201ENST00000477392 IFNA10P01566 189 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 MBP02144 154 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 CT45A6P0DMU7 189 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 CT45A5P0DMU8 189 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 CT45A7P0DMV0 189 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 RAB11AP62491 216 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 DLK1P80370 383 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 ZFP82Q8N141 532 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 OR10G9Q8NGN4 311 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 OR10G7Q8NGN6 311 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 NIPSNAP3BQ9BS92 247 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 NGBQ9NPG2 151 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 TMEM14BQ9NUH8 114 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 VAX2Q9UIW0 290 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 HMGB3O15347 200 aaKnown RBP12.84□□□□□ -0.35
LINC00996-201ENST00000477392 CCL3L1P16619 93 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 CD1BP29016 333 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
LINC00996-201ENST00000477392 RPL31P62899 125 aaKnown RBP12.84□□□□□ -0.35
LINC00996-201ENST00000477392 RNF212Q495C1 297 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 LYPD2Q6UXB3 125 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 SLC35E3Q7Z769 313 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 OR10A7Q8NGE5 316 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 CCL17Q92583 94 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 TVP23CQ96ET8 276 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 GAL3ST2Q9H3Q3 398 aa12.84□□□□□ -0.35
LINC00996-201ENST00000477392 NDUFA2O43678 99 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 IFNA1P01562 189 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 IL6RP08887 468 aaPredicted RBP12.83□□□□□ -0.36
LINC00996-201ENST00000477392 RPP30P78346 268 aaKnown RBP12.83□□□□□ -0.36
LINC00996-201ENST00000477392 ABHD12Q8N2K0 398 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 ZNF709Q8N972 641 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 C2CD4CQ8TF44 421 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 P2RX4Q99571 388 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 TMPRSS5Q9H3S3 457 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 KLF2Q9Y5W3 355 aaPredicted RBP12.83□□□□□ -0.36
LINC00996-201ENST00000477392 A0A087WWC5 75 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 hCG_1809904A0A1W2PP81 198 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 A0A1W2PR64 198 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 A0A1W2PRV1 198 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 C17orf112F2Z3M2 114 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 DEFA4P12838 97 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 MAS1LP35410 378 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.36
LINC00996-201ENST00000477392 NHLH1Q02575 133 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 TMEM200BQ69YZ2 307 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 HEPN1Q6WQI6 88 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 ZNF833PQ6ZTB9 187 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 ZNF714Q96N38 554 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 DYNLRB1Q9NP97 96 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 CTSZQ9UBR2 303 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 RAXQ9Y2V3 346 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 IGF2RP11717 2491 aa12.83□□□□□ -0.36
LINC00996-201ENST00000477392 SMG1Q96Q15 3661 aaKnown RBP12.82□□□□□ -0.36
LINC00996-201ENST00000477392 ZNF727A8MUV8 499 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 VSTM5A8MXK1 200 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 TSPAN9O75954 239 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 OR2C1O95371 312 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 MYOD1P15172 320 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 RAB5AP20339 215 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 HSPE1P61604 102 aaKnown RBP12.82□□□□□ -0.36
LINC00996-201ENST00000477392 TREML4Q6UXN2 200 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 RAB24Q969Q5 203 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 GGACTQ9BVM4 153 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 ACTR3CQ9C0K3 210 aaPredicted RBP12.82□□□□□ -0.36
LINC00996-201ENST00000477392 SLC35D1Q9NTN3 355 aa12.82□□□□□ -0.36
LINC00996-201ENST00000477392 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.81□□□□□ -0.36
LINC00996-201ENST00000477392 HRASP01112 189 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 IGKV1-16P04430 117 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 CD81P60033 236 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 OR13D1Q8NGV5 346 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 MS4A5Q9H3V2 200 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 TNCP24821 2201 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 SMCO3A2RU48 225 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 SRRM4A7MD48 611 aaKnown RBP12.81□□□□□ -0.36
LINC00996-201ENST00000477392 AGAP20933 346 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 RAB5BP61020 215 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 EFNB3Q15768 340 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 GCSAMLQ5JQS6 135 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 GATAD1Q8WUU5 269 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 MRPL20Q9BYC9 149 aaKnown RBP12.81□□□□□ -0.36
LINC00996-201ENST00000477392 BIN3Q9NQY0 253 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 ADGRG4Q8IZF6 3080 aa12.81□□□□□ -0.36
LINC00996-201ENST00000477392 SEC14L6B5MCN3 397 aa12.8□□□□□ -0.36
LINC00996-201ENST00000477392 PLAUP00749 431 aa12.8□□□□□ -0.36
LINC00996-201ENST00000477392 CA7P43166 264 aa12.8□□□□□ -0.36
LINC00996-201ENST00000477392 MEF2BQ02080 365 aaPredicted RBP12.8□□□□□ -0.36
LINC00996-201ENST00000477392 RTL8BQ17RB0 113 aa12.8□□□□□ -0.36
LINC00996-201ENST00000477392 ACOT6Q3I5F7 207 aaPredicted RBP12.8□□□□□ -0.36
LINC00996-201ENST00000477392 RBMS3Q6XE24 437 aaKnown RBP12.8□□□□□ -0.36
LINC00996-201ENST00000477392 H1FXQ92522 213 aaKnown RBP12.8□□□□□ -0.36
LINC00996-201ENST00000477392 C1orf159Q96HA4 380 aa12.8□□□□□ -0.36
LINC00996-201ENST00000477392 MGST2Q99735 147 aa12.8□□□□□ -0.36
LINC00996-201ENST00000477392 OR51B2Q9Y5P1 312 aa12.8□□□□□ -0.36
LINC00996-201ENST00000477392 C1orf196B1AJZ1 125 aa12.79□□□□□ -0.36
LINC00996-201ENST00000477392 UPK2O00526 184 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms