RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 ZNF562Q6V9R5 426 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 FOXRED2Q8IWF2 684 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 DUSP18Q8NEJ0 188 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 TMEM167AQ8TBQ9 72 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 SEC22AQ96IW7 307 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 CLCC1Q96S66 551 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 SERTAD4Q9NUC0 356 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 TMEM140Q9NV12 185 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 NUDT15Q9NV35 164 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 NUBP2Q9Y5Y2 271 aa9.4□□□□□ -0.9
LINC00339-205ENST00000452322 FCN1O00602 326 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 SFT2D2O95562 160 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 KRASP01116 189 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 IL6RP08887 468 aaPredicted RBP9.39□□□□□ -0.91
LINC00339-205ENST00000452322 FGF2P09038 288 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 VAMP1P23763 118 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 G6PCP35575 357 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 CX3CL1P78423 397 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 SRPXP78539 464 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 TMEM95Q3KNT9 176 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 NRARPQ7Z6K4 114 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 RBPMSQ93062 196 aaKnown RBP9.39□□□□□ -0.91
LINC00339-205ENST00000452322 IL22RA2Q969J5 263 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 TMEM56Q96MV1 263 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 ALX4Q9H161 411 aaPredicted RBP9.39□□□□□ -0.91
LINC00339-205ENST00000452322 OR51J1Q9H342 316 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 ZNF430Q9H8G1 570 aaPredicted RBP9.39□□□□□ -0.91
LINC00339-205ENST00000452322 ZNF580Q9UK33 172 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 RNF114Q9Y508 228 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 TMEM56-RWDD3S4R434 201 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
LINC00339-205ENST00000452322 TRAV6A0A075B6T7 132 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 PIGBOS1A0A0B4J2F0 54 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 LINC01548A6NM66 108 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 AP4M1O00189 453 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 UPK2O00526 184 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
LINC00339-205ENST00000452322 IGF1P05019 195 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 OR4E1P0C645 316 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 ANXA7P20073 488 aaKnown RBP9.38□□□□□ -0.91
LINC00339-205ENST00000452322 MAS1LP35410 378 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 MECP2P51608 486 aaKnown RBP9.38□□□□□ -0.91
LINC00339-205ENST00000452322 AKR1C2P52895 323 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 PROK1P58294 105 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 SSBP2P81877 361 aaPredicted RBP9.38□□□□□ -0.91
LINC00339-205ENST00000452322 NDPQ00604 133 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 PJVKQ0ZLH3 352 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 DCTN2Q13561 401 aaKnown RBP9.38□□□□□ -0.91
LINC00339-205ENST00000452322 AWAT1Q58HT5 328 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 ZNF695Q8IW36 515 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 LHFPL5Q8TAF8 219 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 WNT10AQ9GZT5 417 aa9.38□□□□□ -0.91
LINC00339-205ENST00000452322 C9orf170A2RU37 121 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 ATP6V0E1O15342 81 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 ACTL6BO94805 426 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 PTTG1O95997 202 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 IGKV1-5P01602 117 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 H2AFB2P0C5Z0 115 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 P0C879 139 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 CRIP2P52943 208 aaPredicted RBP9.37□□□□□ -0.91
LINC00339-205ENST00000452322 GNB1P62873 340 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 RPL8P62917 257 aaKnown RBP9.37□□□□□ -0.91
LINC00339-205ENST00000452322 DHRS2Q13268 280 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 FXYD3Q14802 87 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 TNXAQ16473 311 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 TMEM268Q5VZI3 342 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 PLET1Q6UQ28 207 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 H2BFWTQ7Z2G1 175 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 LYG2Q86SG7 212 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 FAM219AQ8IW50 185 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 SELENOHQ8IZQ5 122 aaKnown RBP9.37□□□□□ -0.91
LINC00339-205ENST00000452322 LGI3Q8N145 548 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 STPG2Q8N412 459 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 LRTM2Q8N967 370 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 CHPT1Q8WUD6 406 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 ARPC1AQ92747 370 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 RRNAD1Q96FB5 475 aaKnown RBP9.37□□□□□ -0.91
LINC00339-205ENST00000452322 PARP11Q9NR21 331 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 PLXNB1O43157 2135 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 TNCP24821 2201 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 TRAV3A0A0B4J244 114 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 A0A0B4J2A0 478 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 DUXBA0A1W2PPF3 345 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 SNAPC5O75971 98 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 CNIH1O95406 144 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 OR9G9P0C7N8 305 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 HLA-GP17693 338 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 SLC35G3Q8N808 338 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 SGMS2Q8NHU3 365 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 RNASE11Q8TAA1 199 aaKnown RBP9.37□□□□□ -0.91
LINC00339-205ENST00000452322 ABHD5Q8WTS1 349 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 CASTOR1Q8WTX7 329 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
LINC00339-205ENST00000452322 LSM10Q969L4 123 aaKnown RBP9.37□□□□□ -0.91
LINC00339-205ENST00000452322 NOL4LQ96MY1 436 aaPredicted RBP9.37□□□□□ -0.91
LINC00339-205ENST00000452322 GON7Q9BXV9 100 aa9.37□□□□□ -0.91
LINC00339-205ENST00000452322 PRR13Q9NZ81 148 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms