RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 TMEM167AQ8TBQ9 72 aa13.92□□□□□ -0.18
HLCS-205ENST00000448340 TMEM230Q96A57 120 aa13.92□□□□□ -0.18
HLCS-205ENST00000448340 BET1LQ9NYM9 111 aa13.92□□□□□ -0.18
HLCS-205ENST00000448340 ZNF580Q9UK33 172 aa13.92□□□□□ -0.18
HLCS-205ENST00000448340 TBC1D24Q9ULP9 559 aa13.92□□□□□ -0.18
HLCS-205ENST00000448340 KCNIP3Q9Y2W7 256 aa13.92□□□□□ -0.18
HLCS-205ENST00000448340 TNCP24821 2201 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 MARCH11A6NNE9 402 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 KBTBD11O94819 623 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 AKR1C4P17516 323 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 UCP1P25874 307 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 IFITM3Q01628 133 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 PJVKQ0ZLH3 352 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 SP6Q3SY56 376 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 OR4A47Q6IF82 309 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 MZT2BQ6NZ67 158 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 TMED4Q7Z7H5 227 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 STPG2Q8N412 459 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 DMBX1Q8NFW5 382 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 CHPT1Q8WUD6 406 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 WFDC12Q8WWY7 111 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 GALNT14Q96FL9 552 aa13.91□□□□□ -0.18
HLCS-205ENST00000448340 ATP6V0E1O15342 81 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 CNIH1O95406 144 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 KRASP01116 189 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 IGKV1-39P01597 117 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 IGKV1D-39P04432 117 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 IL6RP08887 468 aaPredicted RBP13.9□□□□□ -0.18
HLCS-205ENST00000448340 OR5AC1P0C628 307 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 SLC6A1P30531 599 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 DHODHQ02127 395 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 FXYD3Q14802 87 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 TMEM128Q5BJH2 165 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 CENPVQ7Z7K6 275 aaPredicted RBP13.9□□□□□ -0.18
HLCS-205ENST00000448340 CENPSQ8N2Z9 138 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 WIPF2Q8TF74 440 aaPredicted RBP13.9□□□□□ -0.18
HLCS-205ENST00000448340 GLYATL2Q8WU03 294 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 NOL4LQ96MY1 436 aaPredicted RBP13.9□□□□□ -0.18
HLCS-205ENST00000448340 GON7Q9BXV9 100 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 TMEM222Q9H0R3 208 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 ZNF430Q9H8G1 570 aaPredicted RBP13.9□□□□□ -0.18
HLCS-205ENST00000448340 PARP11Q9NR21 331 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 TMEM140Q9NV12 185 aa13.9□□□□□ -0.18
HLCS-205ENST00000448340 ACTL6BO94805 426 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 ATG12O94817 140 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 CDS2O95674 445 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 MAS1LP35410 378 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 G6PCP35575 357 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 UBE2MP61081 183 aaKnown RBP13.89□□□□□ -0.19
HLCS-205ENST00000448340 GNB1P62873 340 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 SUPT4H1P63272 117 aaKnown RBP13.89□□□□□ -0.19
HLCS-205ENST00000448340 SSBP2P81877 361 aaPredicted RBP13.89□□□□□ -0.19
HLCS-205ENST00000448340 NDPQ00604 133 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 TRIM16LQ309B1 348 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 SLC25A42Q86VD7 318 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 ARPC1AQ92747 370 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 SEC22AQ96IW7 307 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 TSC22D3Q99576 134 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 LINC00527Q9UJ94 153 aa13.89□□□□□ -0.19
HLCS-205ENST00000448340 FAM240BA0A1B0GVZ2 78 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 PSMB11A5LHX3 300 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 UPK2O00526 184 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 ARPC1BO15143 372 aaKnown RBP13.88□□□□□ -0.19
HLCS-205ENST00000448340 FGF2P09038 288 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 ANXA3P12429 323 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 VDAC1P21796 283 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 CRIP2P52943 208 aaPredicted RBP13.88□□□□□ -0.19
HLCS-205ENST00000448340 SLC35B1P78383 322 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 TNXAQ16473 311 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 ABHD5Q8WTS1 349 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 FLVCR2Q9UPI3 526 aa13.88□□□□□ -0.19
HLCS-205ENST00000448340 TCRBP04435 133 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
HLCS-205ENST00000448340 DEFA1P59665 94 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 DEFA3P59666 94 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 KRTAP10-3P60369 221 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 RPL8P62917 257 aaKnown RBP13.87□□□□□ -0.19
HLCS-205ENST00000448340 TMEM267Q0VDI3 215 aaPredicted RBP13.87□□□□□ -0.19
HLCS-205ENST00000448340 TMEM187Q14656 261 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 H2BFWTQ7Z2G1 175 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 OR5AU1Q8NGC0 362 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 GRPEL2Q8TAA5 225 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 FBXO7Q9Y3I1 522 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 NUBP2Q9Y5Y2 271 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
HLCS-205ENST00000448340 TRAV3A0A0B4J244 114 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 TRAV41A0A0B4J266 112 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 HLA-GP17693 338 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 SRPXP78539 464 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 CFHR3Q02985 330 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 AKIRIN2Q53H80 203 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 ZNF329Q86UD4 541 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 ZNF695Q8IW36 515 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 COMMD1Q8N668 190 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 SRSF12Q8WXF0 261 aaKnown RBP13.86□□□□□ -0.19
HLCS-205ENST00000448340 RBPMSQ93062 196 aaKnown RBP13.86□□□□□ -0.19
HLCS-205ENST00000448340 IL22RA2Q969J5 263 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 TMEM68Q96MH6 324 aa13.86□□□□□ -0.19
HLCS-205ENST00000448340 FAM103A1Q9BTL3 118 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms