RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 LRTM2Q8N967 370 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 TMEM167AQ8TBQ9 72 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 ZNF431Q8TF32 576 aaPredicted RBP8.75□□□□□ -1.01
CHD4-202ENST00000430771 RBMXL1Q96E39 390 aaKnown RBP8.75□□□□□ -1.01
CHD4-202ENST00000430771 SEC22AQ96IW7 307 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 RITA1Q96K30 269 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 PLSCR3Q9NRY6 295 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 SHPKQ9UHJ6 478 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 SIGLEC9Q9Y336 463 aa8.75□□□□□ -1.01
CHD4-202ENST00000430771 MXRA5Q9NR99 2828 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 SNAPC5O75971 98 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 NDUFA7O95182 113 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 IGKV1-39P01597 117 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 IGKV1D-39P04432 117 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 CRYGBP07316 175 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 VDAC1P21796 283 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 MAS1LP35410 378 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 RPL8P62917 257 aaKnown RBP8.74□□□□□ -1.01
CHD4-202ENST00000430771 OXA1LQ15070 435 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 SLC35E3Q7Z769 313 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 FOXRED2Q8IWF2 684 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 SELENOHQ8IZQ5 122 aaKnown RBP8.74□□□□□ -1.01
CHD4-202ENST00000430771 OR2T6Q8NHC8 308 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 LHFPL5Q8TAF8 219 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 MITD1Q8WV92 249 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 LSM10Q969L4 123 aaKnown RBP8.74□□□□□ -1.01
CHD4-202ENST00000430771 TPSG1Q9NRR2 321 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 MMP24Q9Y5R2 645 aa8.74□□□□□ -1.01
CHD4-202ENST00000430771 C15orf61A6NNL5 157 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 SNRPGP15A8MWD9 76 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 UPK2O00526 184 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 RBMXL2O75526 392 aaKnown RBP8.73□□□□□ -1.01
CHD4-202ENST00000430771 TSPAN9O75954 239 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 AMY1AP04745 511 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 SPNP16150 400 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 VDAC2P45880 294 aaPredicted RBP8.73□□□□□ -1.01
CHD4-202ENST00000430771 GNB1P62873 340 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 TNXAQ16473 311 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 PRSS8Q16651 343 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 ANKRD55Q3KP44 614 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 THOC7Q6I9Y2 204 aaKnown RBP8.73□□□□□ -1.01
CHD4-202ENST00000430771 Q8N2B8 174 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 OR52B4Q8NGK2 314 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 OR4F5Q8NH21 305 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 OR4A16Q8NH70 328 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 ABHD5Q8WTS1 349 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 CHPT1Q8WUD6 406 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 ARPC1AQ92747 370 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 SPIN2AQ99865 258 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 SPIN2BQ9BPZ2 258 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 SEC22CQ9BRL7 303 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 PDCD10Q9BUL8 212 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 COMMD5Q9GZQ3 224 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 ZNF430Q9H8G1 570 aaPredicted RBP8.73□□□□□ -1.01
CHD4-202ENST00000430771 ZNF702PQ9H963 129 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 FKBP11Q9NYL4 201 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 PRR13Q9NZ81 148 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 PRNDQ9UKY0 176 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 TMED3Q9Y3Q3 217 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 CUBNO60494 3623 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 JMJD1CQ15652 2540 aa8.73□□□□□ -1.01
CHD4-202ENST00000430771 IGHV7-81A0A0B4J1V7 117 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 SH2D7A6NKC9 451 aaPredicted RBP8.72□□□□□ -1.01
CHD4-202ENST00000430771 AP4M1O00189 453 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 CNIH1O95406 144 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 IFNA21P01568 189 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 IGKV1-5P01602 117 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 IGHG2P01859 326 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 HLA-GP17693 338 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 RIPPLY3P57055 190 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 BLCAPP62952 87 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 TATDN3Q17R31 274 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 ZNF562Q6V9R5 426 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 Q6ZSV7 163 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 PRIMA1Q86XR5 153 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 C12orf45Q8N5I9 185 aaPredicted RBP8.72□□□□□ -1.01
CHD4-202ENST00000430771 CLCC1Q96S66 551 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 HSPB9Q9BQS6 159 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 OR51J1Q9H342 316 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 PARP11Q9NR21 331 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 CACFD1Q9UGQ2 172 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 ZNF580Q9UK33 172 aa8.72□□□□□ -1.01
CHD4-202ENST00000430771 A0A1B0GUS0 222 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 C7orf66A4D0T2 115 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 ATP6V0E1O15342 81 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 IL6RP08887 468 aaPredicted RBP8.71□□□□□ -1.02
CHD4-202ENST00000430771 OR9G9P0C7N8 305 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 P0C879 139 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 SULT1A3P0DMM9 295 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 SULT1A4P0DMN0 295 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 HKR1P10072 659 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 RPL27AP46776 148 aaKnown RBP8.71□□□□□ -1.02
CHD4-202ENST00000430771 COMPP49747 757 aaPredicted RBP8.71□□□□□ -1.02
CHD4-202ENST00000430771 OR2B8PP59922 312 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 NDPQ00604 133 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 SRSF2Q01130 221 aaKnown RBP8.71□□□□□ -1.02
CHD4-202ENST00000430771 RELBQ01201 579 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 FXYD3Q14802 87 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 NMSQ5H8A3 153 aa8.71□□□□□ -1.02
CHD4-202ENST00000430771 LYZL2Q7Z4W2 148 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms