RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 PUS1Q9Y606 427 aaKnown RBP eCLIP11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 C7orf77A4D0Y5 90 aa11.46□□□□□ -0.58
APOBEC3D-202ENST00000427494 H7C2Y5 167 aa11.46□□□□□ -0.58
APOBEC3D-202ENST00000427494 IGKV1D-33P01593 117 aa11.46□□□□□ -0.58
APOBEC3D-202ENST00000427494 IGKV1-33P01594 117 aa11.46□□□□□ -0.58
APOBEC3D-202ENST00000427494 ADORA2A-AS1P86434 159 aa11.46□□□□□ -0.58
APOBEC3D-202ENST00000427494 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.58
APOBEC3D-202ENST00000427494 OR13D1Q8NGV5 346 aa11.46□□□□□ -0.58
APOBEC3D-202ENST00000427494 ARFGEF3Q5TH69 2177 aa11.46□□□□□ -0.58
APOBEC3D-202ENST00000427494 ROS1P08922 2347 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 C17orf112F2Z3M2 114 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 RRHO14718 337 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 SIAH2O43255 324 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 EIF3GO75821 320 aaKnown RBP eCLIP11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 MBP02144 154 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 BCL2P10415 239 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 LOXP28300 417 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 ZNF833PQ6ZTB9 187 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 TMEM14BQ9NUH8 114 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 KAAG1Q9UBP8 84 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 IGF2RP11717 2491 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 SMCO3A2RU48 225 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 MDKP21741 143 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 CD1BP29016 333 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 PLA2G5P39877 138 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 RHEBQ15382 184 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 CDSNQ15517 529 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 POU2AF1Q16633 256 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 ABHD12Q8N2K0 398 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 MUC15Q8N387 334 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 OR10G4Q8NGN3 311 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 OR10G9Q8NGN4 311 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 OR10G7Q8NGN6 311 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 RAB39BQ96DA2 213 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 MRPL20Q9BYC9 149 aaKnown RBP11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 SLC25A22Q9H936 323 aa11.45□□□□□ -0.58
APOBEC3D-202ENST00000427494 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
APOBEC3D-202ENST00000427494 HSPE1P61604 102 aaKnown RBP11.44□□□□□ -0.58
APOBEC3D-202ENST00000427494 RAB11AP62491 216 aa11.44□□□□□ -0.58
APOBEC3D-202ENST00000427494 LHX4Q969G2 390 aa11.44□□□□□ -0.58
APOBEC3D-202ENST00000427494 ENY2Q9NPA8 101 aa11.44□□□□□ -0.58
APOBEC3D-202ENST00000427494 OR51B2Q9Y5P1 312 aa11.44□□□□□ -0.58
APOBEC3D-202ENST00000427494 POLEQ07864 2286 aa11.44□□□□□ -0.58
APOBEC3D-202ENST00000427494 CTXND1A0A1B0GTU2 59 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 H3BQ15 152 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 NDUFA2O43678 99 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 IFNA1P01562 189 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 APOA2P02652 100 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 MYOD1P15172 320 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 ZNF672Q499Z4 452 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 FAM122CQ6P4D5 195 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 C15orf54Q8N8G6 183 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 OR10X1Q8NGY0 326 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 CA5BP1Q8WTZ4 195 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 PRNDQ9UKY0 176 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 WDR83OSQ9Y284 106 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 PKDREJQ9NTG1 2253 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 COLCA2A8K830 154 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 UPK2O00526 184 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 IFNA4P05014 189 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 C1QTNF9P0C862 333 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 TMEM170AQ8WVE7 144 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 GGACTQ9BVM4 153 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 HINT2Q9BX68 163 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 ACTR3CQ9C0K3 210 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 MLXQ9UH92 298 aa11.43□□□□□ -0.58
APOBEC3D-202ENST00000427494 SRRM4A7MD48 611 aaKnown RBP11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 REG1BP48304 166 aa11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 DLX6P56179 175 aa11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 DLK1P80370 383 aa11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 ACOT6Q3I5F7 207 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 TMEM155Q4W5P6 130 aa11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 SLC24A4Q8NFF2 622 aa11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 VAX2Q9UIW0 290 aa11.42□□□□□ -0.58
APOBEC3D-202ENST00000427494 H0YJW9 148 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 J3QR06 171 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 IL6RP08887 468 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 COL8A2P25067 703 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 NPY1RP25929 384 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 PAX6P26367 422 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 FLI1Q01543 452 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 SMUG1Q53HV7 270 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 AVPI1Q5T686 147 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 Q8N7P7 452 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 NIPSNAP3BQ9BS92 247 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 A0A1W2PPH5 198 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 TREML4Q6UXN2 200 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 LINC00311Q8N616 119 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 ISOC2Q96AB3 205 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 PLEKHA3Q9HB20 300 aa11.41□□□□□ -0.58
APOBEC3D-202ENST00000427494 A0A1W2PPE2 198 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 CYB5BO43169 146 aa11.4□□□□□ -0.58
APOBEC3D-202ENST00000427494 MPDU1O75352 247 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms