RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 HSPB9Q9BQS6 159 aa13.16□□□□□ -0.3
SUMO1-208ENST00000409627 TMEM140Q9NV12 185 aa13.16□□□□□ -0.3
SUMO1-208ENST00000409627 IGHV7-81A0A0B4J1V7 117 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 PIGBOS1A0A0B4J2F0 54 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 C9orf170A2RU37 121 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 FCN1O00602 326 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 CA2P00918 260 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 HLA-AP01891 365 aaKnown RBP13.15□□□□□ -0.3
SUMO1-208ENST00000409627 FGF2P09038 288 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 DHRS2Q13268 280 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 PRSS8Q16651 343 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 MRGPRG-AS1Q2M3A8 158 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 C4orf46Q504U0 113 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 SLC35E3Q7Z769 313 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 LYG2Q86SG7 212 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 ZNF695Q8IW36 515 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 MMD2Q8IY49 270 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 SELENOHQ8IZQ5 122 aaKnown RBP13.15□□□□□ -0.3
SUMO1-208ENST00000409627 LGI3Q8N145 548 aa13.15□□□□□ -0.3
SUMO1-208ENST00000409627 TMEM89A2RUT3 159 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 UPK2O00526 184 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 IGKV1-5P01602 117 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 P0C879 139 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 AKR1C2P52895 323 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 PJVKQ0ZLH3 352 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 ARSJQ5FYB0 599 aaPredicted RBP13.14□□□□□ -0.31
SUMO1-208ENST00000409627 TMEM268Q5VZI3 342 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 ZNF562Q6V9R5 426 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 LRTM2Q8N967 370 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 LINC01006Q8NI28 216 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 TMEM158Q8WZ71 300 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 CLCC1Q96S66 551 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 MARVELD1Q9BSK0 173 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 ZNF430Q9H8G1 570 aaPredicted RBP13.14□□□□□ -0.31
SUMO1-208ENST00000409627 BEX1Q9HBH7 125 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 PRR13Q9NZ81 148 aa13.14□□□□□ -0.31
SUMO1-208ENST00000409627 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 DUXBA0A1W2PPF3 345 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 DUS4LO95620 317 aaKnown RBP13.13□□□□□ -0.31
SUMO1-208ENST00000409627 MAS1LP35410 378 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 VDAC2P45880 294 aaPredicted RBP13.13□□□□□ -0.31
SUMO1-208ENST00000409627 CX3CL1P78423 397 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 SSBP2P81877 361 aaPredicted RBP13.13□□□□□ -0.31
SUMO1-208ENST00000409627 NDPQ00604 133 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 FOXL1Q12952 345 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 RGS21Q2M5E4 152 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 ANKRD55Q3KP44 614 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 H2BFWTQ7Z2G1 175 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 FAM219AQ8IW50 185 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 FOXRED2Q8IWF2 684 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 CASTOR1Q8WTX7 329 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 C19orf24Q9BVV8 132 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 MMP24Q9Y5R2 645 aa13.13□□□□□ -0.31
SUMO1-208ENST00000409627 A0A0B4J2A0 478 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 CLPSL1A2RUU4 121 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 INMT-MINDY4F8WBC2 141 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 AP4M1O00189 453 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 IL5P05113 134 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 OR9G9P0C7N8 305 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 SPNP16150 400 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 RAB25P57735 213 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 RPL8P62917 257 aaKnown RBP13.12□□□□□ -0.31
SUMO1-208ENST00000409627 TNXAQ16473 311 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 TMEM95Q3KNT9 176 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 SLC35G3Q8N808 338 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 LSM10Q969L4 123 aaKnown RBP13.12□□□□□ -0.31
SUMO1-208ENST00000409627 RRNAD1Q96FB5 475 aaKnown RBP13.12□□□□□ -0.31
SUMO1-208ENST00000409627 SERTAD4Q9NUC0 356 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 SHPKQ9UHJ6 478 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 PLXNB1O43157 2135 aa13.12□□□□□ -0.31
SUMO1-208ENST00000409627 TRAV3A0A0B4J244 114 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 LINC01548A6NM66 108 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 ATP6V0E1O15342 81 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 PRAF2O60831 178 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 SNAPC5O75971 98 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 ACTL6BO94805 426 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 IGF1P05019 195 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 HLA-GP17693 338 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 MDKP21741 143 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-208ENST00000409627 VDAC1P21796 283 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 COMPP49747 757 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-208ENST00000409627 CRIP2P52943 208 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-208ENST00000409627 GNB1P62873 340 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 FXYD3Q14802 87 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 OR52B4Q8NGK2 314 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 COQ8AQ8NI60 647 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 RNASE11Q8TAA1 199 aaKnown RBP13.11□□□□□ -0.31
SUMO1-208ENST00000409627 ZNF431Q8TF32 576 aaPredicted RBP13.11□□□□□ -0.31
SUMO1-208ENST00000409627 MITD1Q8WV92 249 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 ARPC1AQ92747 370 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 PARP11Q9NR21 331 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 TNCP24821 2201 aa13.11□□□□□ -0.31
SUMO1-208ENST00000409627 A0A0G2JRQ6 117 aa13.1□□□□□ -0.31
SUMO1-208ENST00000409627 C15orf61A6NNL5 157 aa13.1□□□□□ -0.31
SUMO1-208ENST00000409627 CNIH1O95406 144 aa13.1□□□□□ -0.31
SUMO1-208ENST00000409627 DHFRP00374 187 aa13.1□□□□□ -0.31
SUMO1-208ENST00000409627 LYZL2Q7Z4W2 148 aa13.1□□□□□ -0.31
SUMO1-208ENST00000409627 SRSF12Q8WXF0 261 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms