RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 FOLR2P14207 255 aa20.98■□□□□ 0.95
SMARCD3-203ENST00000392811 CCL3L1P16619 93 aa20.98■□□□□ 0.95
SMARCD3-203ENST00000392811 CD1BP29016 333 aa20.98■□□□□ 0.95
SMARCD3-203ENST00000392811 LYPD2Q6UXB3 125 aa20.98■□□□□ 0.95
SMARCD3-203ENST00000392811 WDR83OSQ9Y284 106 aa20.98■□□□□ 0.95
SMARCD3-203ENST00000392811 TNFRSF13BO14836 293 aaPredicted RBP20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 HOXA1P49639 335 aaPredicted RBP20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 UCNP55089 124 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 RAB11AP62491 216 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 TMEM200BQ69YZ2 307 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 ABHD12Q8N2K0 398 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 OR10A7Q8NGE5 316 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 NIPSNAP3BQ9BS92 247 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 CTXND1A0A1B0GTU2 59 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 C17orf112F2Z3M2 114 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 HMGB3O15347 200 aaKnown RBP20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 MT-ND4LP03901 98 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 FAM90A2PQ658T7 463 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 Q8N7P7 452 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 CA5BP1Q8WTZ4 195 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 TMEM170AQ8WVE7 144 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 ZNF714Q96N38 554 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 TMEM14BQ9NUH8 114 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 VAX2Q9UIW0 290 aa20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 FOXA2Q9Y261 457 aaPredicted RBP20.97■□□□□ 0.95
SMARCD3-203ENST00000392811 IFNA1P01562 189 aa20.96■□□□□ 0.95
SMARCD3-203ENST00000392811 POU2AF1Q16633 256 aa20.96■□□□□ 0.95
SMARCD3-203ENST00000392811 TVP23CQ96ET8 276 aa20.96■□□□□ 0.95
SMARCD3-203ENST00000392811 SMG1Q96Q15 3661 aaKnown RBP20.96■□□□□ 0.95
SMARCD3-203ENST00000392811 PRSS46E5RG02 174 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 HRASP01112 189 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 RAB13P51153 203 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 CASP6P55212 293 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 PMS2P11Q13670 270 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 HEPN1Q6WQI6 88 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 H1FXQ92522 213 aaKnown RBP20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 MS4A5Q9H3V2 200 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 SAV1Q9H4B6 383 aaPredicted RBP20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 NDUFB3O43676 98 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 CD3EP07766 207 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 TAGLN2P37802 199 aaKnown RBP20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 DLK1P80370 383 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 ZFP82Q8N141 532 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 ACTR3CQ9C0K3 210 aaPredicted RBP20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 SLC35D1Q9NTN3 355 aa20.95■□□□□ 0.94
SMARCD3-203ENST00000392811 APOBEC3AP31941 199 aaPredicted RBP20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 CA7P43166 264 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 HSPE1P61604 102 aaKnown RBP20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 FAM24BQ8N5W8 94 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 P2RX4Q99571 388 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 TMPRSS5Q9H3S3 457 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 CTSZQ9UBR2 303 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 ADGRG4Q8IZF6 3080 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 PKDREJQ9NTG1 2253 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 SMCO3A2RU48 225 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 IGKV1-16P04430 117 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 RTL8BQ17RB0 113 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 ZNF833PQ6ZTB9 187 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 SLC35E3Q7Z769 313 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 OR13D1Q8NGV5 346 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 LINC01560Q8TB33 94 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 GGACTQ9BVM4 153 aa20.94■□□□□ 0.94
SMARCD3-203ENST00000392811 FAM90A27PA6NNH2 459 aa20.93■□□□□ 0.94
SMARCD3-203ENST00000392811 OR2C1O95371 312 aa20.93■□□□□ 0.94
SMARCD3-203ENST00000392811 MYOD1P15172 320 aa20.93■□□□□ 0.94
SMARCD3-203ENST00000392811 EFNB3Q15768 340 aa20.93■□□□□ 0.94
SMARCD3-203ENST00000392811 RNF212Q495C1 297 aa20.93■□□□□ 0.94
SMARCD3-203ENST00000392811 LRRC10Q5BKY1 277 aa20.93■□□□□ 0.94
SMARCD3-203ENST00000392811 RBMS3Q6XE24 437 aaKnown RBP20.93■□□□□ 0.94
SMARCD3-203ENST00000392811 RAB24Q969Q5 203 aa20.93■□□□□ 0.94
SMARCD3-203ENST00000392811 PLAUP00749 431 aa20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 C2CD4CQ8TF44 421 aa20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 ZNF727A8MUV8 499 aa20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 DVL1O14640 695 aa20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 TSPAN9O75954 239 aa20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 IFNA4P05014 189 aa20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 IL6RP08887 468 aaPredicted RBP20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 HABP2Q14520 560 aaPredicted RBP20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 TREML4Q6UXN2 200 aa20.92■□□□□ 0.94
SMARCD3-203ENST00000392811 hCG_1809904A0A1W2PP81 198 aa20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 A0A1W2PR64 198 aa20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 A0A1W2PRV1 198 aa20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 SRRM4A7MD48 611 aaKnown RBP20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 DEFA4P12838 97 aa20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 ACOT6Q3I5F7 207 aaPredicted RBP20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 YPEL4Q96NS1 127 aa20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 MRPL20Q9BYC9 149 aaKnown RBP20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 OR51B2Q9Y5P1 312 aa20.91■□□□□ 0.94
SMARCD3-203ENST00000392811 A0A087WWC5 75 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 B9A039 149 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 CYB5BO43169 146 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 RAB5AP20339 215 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 PRNDQ9UKY0 176 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 POLEQ07864 2286 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 IGHV1-69-2A0A0G2JMI3 117 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 UPK2O00526 184 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 MPDU1O75352 247 aa20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 GRNP28799 593 aaKnown RBP20.9■□□□□ 0.94
SMARCD3-203ENST00000392811 CD81P60033 236 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms