RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 TRAV6A0A075B6T7 132 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 A0A1B0GUS0 222 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 KCNAB3O43448 404 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 KBTBD11O94819 623 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 CA2P00918 260 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 ANXA7P20073 488 aaKnown RBP12.21□□□□□ -0.45
PDGFB-202ENST00000381551 SSBP2P81877 361 aaPredicted RBP12.21□□□□□ -0.45
PDGFB-202ENST00000381551 PPP1R1AQ13522 171 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 TRIM16LQ309B1 348 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 TMEM95Q3KNT9 176 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
PDGFB-202ENST00000381551 OR4A5Q8NH83 315 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 LHFPL5Q8TAF8 219 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 ENKURQ8TC29 256 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 MDFIQ99750 246 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 OR51J1Q9H342 316 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 ZNF430Q9H8G1 570 aaPredicted RBP12.21□□□□□ -0.45
PDGFB-202ENST00000381551 TMEM140Q9NV12 185 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 NUDT15Q9NV35 164 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 RNF114Q9Y508 228 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 NUBP2Q9Y5Y2 271 aa12.21□□□□□ -0.45
PDGFB-202ENST00000381551 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 UPK2O00526 184 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 SFT2D2O95562 160 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 IGKV1-5P01602 117 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 H2AFB2P0C5Z0 115 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 OR4E1P0C645 316 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 ANXA3P12429 323 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 VDAC2P45880 294 aaPredicted RBP12.2□□□□□ -0.46
PDGFB-202ENST00000381551 COMPP49747 757 aaPredicted RBP12.2□□□□□ -0.46
PDGFB-202ENST00000381551 MECP2P51608 486 aaKnown RBP12.2□□□□□ -0.46
PDGFB-202ENST00000381551 ERVK-16P61578 105 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 ARSJQ5FYB0 599 aaPredicted RBP12.2□□□□□ -0.46
PDGFB-202ENST00000381551 MMD2Q8IY49 270 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 WNT10AQ9GZT5 417 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 PRR13Q9NZ81 148 aa12.2□□□□□ -0.46
PDGFB-202ENST00000381551 TNCP24821 2201 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 COL6A5A8TX70 2615 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 C9orf170A2RU37 121 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 AP4M1O00189 453 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 ATG12O94817 140 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 IGF1P05019 195 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 EGR2P11161 476 aaPredicted RBP12.19□□□□□ -0.46
PDGFB-202ENST00000381551 VAMP1P23763 118 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 PROK1P58294 105 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 DCTN2Q13561 401 aaKnown RBP12.19□□□□□ -0.46
PDGFB-202ENST00000381551 FXYD3Q14802 87 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 AWAT1Q58HT5 328 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 ZNF695Q8IW36 515 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 FOXRED2Q8IWF2 684 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 RBPMSQ93062 196 aaKnown RBP12.19□□□□□ -0.46
PDGFB-202ENST00000381551 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 LINC00527Q9UJ94 153 aa12.19□□□□□ -0.46
PDGFB-202ENST00000381551 CREBL2O60519 120 aaPredicted RBP12.18□□□□□ -0.46
PDGFB-202ENST00000381551 CNIH1O95406 144 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 OR9G9P0C7N8 305 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 P0C879 139 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 MAS1LP35410 378 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 GNB1P62873 340 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 RPL8P62917 257 aaKnown RBP12.18□□□□□ -0.46
PDGFB-202ENST00000381551 NDPQ00604 133 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 DHRS2Q13268 280 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 ANKRD55Q3KP44 614 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 TMEM268Q5VZI3 342 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 LGI3Q8N145 548 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 LRTM2Q8N967 370 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 NOL4LQ96MY1 436 aaPredicted RBP12.18□□□□□ -0.46
PDGFB-202ENST00000381551 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 FBXO7Q9Y3I1 522 aa12.18□□□□□ -0.46
PDGFB-202ENST00000381551 HAX1O00165 279 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 ATP6V0E1O15342 81 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 HLA-AP01891 365 aaKnown RBP12.17□□□□□ -0.46
PDGFB-202ENST00000381551 FGF2P09038 288 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 HLA-GP17693 338 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 RAB25P57735 213 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 SRPXP78539 464 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 TNXAQ16473 311 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 C4orf46Q504U0 113 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 CENPVQ7Z7K6 275 aaPredicted RBP12.17□□□□□ -0.46
PDGFB-202ENST00000381551 LYG2Q86SG7 212 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 STPG2Q8N412 459 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 WIPF2Q8TF74 440 aaPredicted RBP12.17□□□□□ -0.46
PDGFB-202ENST00000381551 ARPC1AQ92747 370 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 LSM10Q969L4 123 aaKnown RBP12.17□□□□□ -0.46
PDGFB-202ENST00000381551 MARVELD1Q9BSK0 173 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 PARP11Q9NR21 331 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 NSG2Q9Y328 171 aa12.17□□□□□ -0.46
PDGFB-202ENST00000381551 A0A0B4J293 547 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 A0A0B4J2A0 478 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 A0A0G2JRQ6 117 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 MSGN1A6NI15 193 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 E7EUB6 86 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 G3V318 75 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 SNAPC5O75971 98 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 ACTL6BO94805 426 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 DUS4LO95620 317 aaKnown RBP12.16□□□□□ -0.46
PDGFB-202ENST00000381551 MYOD1P15172 320 aa12.16□□□□□ -0.46
PDGFB-202ENST00000381551 SPNP16150 400 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms