RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 MGPP08493 103 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 CELA3BP08861 270 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 GSX1Q9H4S2 264 aaPredicted RBP11.37□□□□□ -0.59
LDB3-202ENST00000361373 NYNRINQ9P2P1 1898 aaKnown RBP11.37□□□□□ -0.59
LDB3-202ENST00000361373 YPEL1O60688 119 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 SPSB4Q96A44 273 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 YPEL2Q96QA6 119 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 TP53RKQ96S44 253 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 MAP1LC3CQ9BXW4 147 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 SHISA3A0PJX4 238 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 ZNF137PP52743 207 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 GGNQ86UU5 652 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 SGMS2Q8NHU3 365 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 NPIPB3Q92617 1050 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 AUP1Q9Y679 476 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 THADAQ6YHU6 1953 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 NDUFB4O95168 129 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 SNRPEP62304 92 aaKnown RBP11.37□□□□□ -0.59
LDB3-202ENST00000361373 LCN2P80188 198 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 LYRM7Q5U5X0 104 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 SIGIRRQ6IA17 410 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
LDB3-202ENST00000361373 MRPL37Q9BZE1 423 aaKnown RBP11.37□□□□□ -0.59
LDB3-202ENST00000361373 C7orf69Q9H7B7 122 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 DOCK4Q8N1I0 1966 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 A1L4Q6 167 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 SNRPD3P62318 126 aaKnown RBP11.36□□□□□ -0.59
LDB3-202ENST00000361373 RPL39P5Q59GN2 51 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 MDS2Q8NDY4 140 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 CACNG8Q8WXS5 425 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 RALGAPA1Q6GYQ0 2036 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 MOSP00540 346 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 NMBP08949 121 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 MAS1LP35410 378 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 MFAP2P55001 183 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 MYOZ3Q8TDC0 251 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 NEUROG3Q9Y4Z2 214 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 CRYGSP22914 178 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 IER3P46695 156 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 JMJD8Q96S16 334 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 NABP2Q9BQ15 211 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 GPR179Q6PRD1 2367 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 TRBV6-7A0A0A0MS04 114 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 IGHV1-18A0A0C4DH31 117 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 THBDP07204 575 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 H2BFSP57053 126 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 ZNF880Q6PDB4 577 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 MSRB2Q9Y3D2 182 aa11.36□□□□□ -0.59
LDB3-202ENST00000361373 GCSHP23434 173 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 CA7P43166 264 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 TFPI2P48307 235 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 RRN3P1Q2M238 152 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 IBA57Q5T440 356 aaKnown RBP11.35□□□□□ -0.59
LDB3-202ENST00000361373 TNFRSF14Q92956 283 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 ZNF343Q6P1L6 599 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 WDR82Q6UXN9 313 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 IFI27L2Q9H2X8 130 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
LDB3-202ENST00000361373 TRGV3P03979 118 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 RNASEH2CQ8TDP1 164 aaKnown RBP11.35□□□□□ -0.59
LDB3-202ENST00000361373 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 TMEM8BA6NDV4 472 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 H0YL77 283 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 TGFAP01135 160 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 Q6ZS92 163 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 FAM89BQ8N5H3 189 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 GPHA2Q96T91 129 aa11.35□□□□□ -0.59
LDB3-202ENST00000361373 NPIPB6E9PJ23 425 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 RBFOX2O43251 390 aaKnown RBP eCLIP11.34□□□□□ -0.59
LDB3-202ENST00000361373 DLX6P56179 175 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 SIP14410 1827 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 CA2P00918 260 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 DANCRP0C864 163 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 MBNL2Q5VZF2 373 aaKnown RBP11.34□□□□□ -0.59
LDB3-202ENST00000361373 ISOC2Q96AB3 205 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 MST1P26927 711 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 VAMP3Q15836 100 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 FAM201AQ5SY85 155 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 OR4A47Q6IF82 309 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 SIAH2O43255 324 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 EFNA2O43921 213 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 PLAUP00749 431 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 UNQ6494/PRO21346Q6UXR6 183 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 VKORC1L1Q8N0U8 176 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 FUT9Q9Y231 359 aa11.34□□□□□ -0.59
LDB3-202ENST00000361373 ZSWIM8A7E2V4 1837 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 J3QRE1 110 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 IGKV1D-33P01593 117 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 IGKV1-33P01594 117 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 IGHG3P01860 377 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 ZNF385CQ66K41 422 aaPredicted RBP11.33□□□□□ -0.6
LDB3-202ENST00000361373 CYP2G1PQ6ZSU1 146 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 OR4X2Q8NGF9 303 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 FBXL15Q9H469 300 aa11.33□□□□□ -0.6
LDB3-202ENST00000361373 M0R143 59 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms