RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PIGBOS1A0A0B4J2F0 54 aa12.09□□□□□ -0.47
TPM1-206ENST00000358278 RAG2P55895 527 aa12.09□□□□□ -0.47
TPM1-206ENST00000358278 SELENOHQ8IZQ5 122 aaKnown RBP12.09□□□□□ -0.47
TPM1-206ENST00000358278 PUSL1Q8N0Z8 303 aaKnown RBP12.09□□□□□ -0.47
TPM1-206ENST00000358278 TAF15Q92804 592 aaKnown RBP eCLIP12.09□□□□□ -0.47
TPM1-206ENST00000358278 IL22RA2Q969J5 263 aa12.09□□□□□ -0.47
TPM1-206ENST00000358278 TMEM56Q96MV1 263 aa12.09□□□□□ -0.47
TPM1-206ENST00000358278 SEC22CQ9BRL7 303 aa12.09□□□□□ -0.47
TPM1-206ENST00000358278 TMEM56-RWDD3S4R434 201 aa12.09□□□□□ -0.47
TPM1-206ENST00000358278 ACTL6BO94805 426 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 DUS4LO95620 317 aaKnown RBP12.08□□□□□ -0.47
TPM1-206ENST00000358278 DHFRP00374 187 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 CA2P00918 260 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 CRYGBP07316 175 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 GNB1P62873 340 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 ANKRD55Q3KP44 614 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 Q6ZSV7 163 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 SLC35G3Q8N808 338 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 OR2T6Q8NHC8 308 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 COQ8AQ8NI60 647 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 ZNF702PQ9H963 129 aa12.08□□□□□ -0.47
TPM1-206ENST00000358278 FCN1O00602 326 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 KCNAB3O43448 404 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 PRAF2O60831 178 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 CNIH1O95406 144 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 RELBQ01201 579 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 PJVKQ0ZLH3 352 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 PRSS8Q16651 343 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 Q6ZS46 218 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 MMD2Q8IY49 270 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 OR4A5Q8NH83 315 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 TMEM167AQ8TBQ9 72 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 ABHD5Q8WTS1 349 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 PHB2Q99623 299 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 HSPB9Q9BQS6 159 aa12.08□□□□□ -0.48
TPM1-206ENST00000358278 ZNF430Q9H8G1 570 aaPredicted RBP12.08□□□□□ -0.48
TPM1-206ENST00000358278 GPN1Q9HCN4 374 aaPredicted RBP12.08□□□□□ -0.48
TPM1-206ENST00000358278 A0A0B4J2A0 478 aa12.07□□□□□ -0.48
TPM1-206ENST00000358278 TSPAN9O75954 239 aa12.07□□□□□ -0.48
TPM1-206ENST00000358278 SNAPC5O75971 98 aa12.07□□□□□ -0.48
TPM1-206ENST00000358278 RPL8P62917 257 aaKnown RBP12.07□□□□□ -0.48
TPM1-206ENST00000358278 TNXAQ16473 311 aa12.07□□□□□ -0.48
TPM1-206ENST00000358278 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
TPM1-206ENST00000358278 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.07□□□□□ -0.48
TPM1-206ENST00000358278 ZNF431Q8TF32 576 aaPredicted RBP12.07□□□□□ -0.48
TPM1-206ENST00000358278 SHPKQ9UHJ6 478 aa12.07□□□□□ -0.48
TPM1-206ENST00000358278 MMP24Q9Y5R2 645 aa12.07□□□□□ -0.48
TPM1-206ENST00000358278 FBN1P35555 2871 aaKnown RBP12.07□□□□□ -0.48
TPM1-206ENST00000358278 IGHV7-81A0A0B4J1V7 117 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 DUXBA0A1W2PPF3 345 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 RBMXL2O75526 392 aaKnown RBP12.06□□□□□ -0.48
TPM1-206ENST00000358278 NDUFA7O95182 113 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 IGHG2P01859 326 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 IL5P05113 134 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 VDAC2P45880 294 aaPredicted RBP12.06□□□□□ -0.48
TPM1-206ENST00000358278 TMEM95Q3KNT9 176 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 LYZL2Q7Z4W2 148 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 FAM219AQ8IW50 185 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 Q8N2B8 174 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 LRTM2Q8N967 370 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 OR4F5Q8NH21 305 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 OR4A16Q8NH70 328 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 MITD1Q8WV92 249 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 PARP11Q9NR21 331 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 TRAV3A0A0B4J244 114 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 HAX1O00165 279 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 UPK2O00526 184 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 OR9G9P0C7N8 305 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 HKR1P10072 659 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 HLA-GP17693 338 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 VDAC1P21796 283 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 OR2B8PP59922 312 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 CX3CL1P78423 397 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 FXYD3Q14802 87 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 IZUMO4Q1ZYL8 232 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 ZNF562Q6V9R5 426 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 FOXRED2Q8IWF2 684 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 CADM3Q8N126 398 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 UXS1Q8NBZ7 420 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 GRPEL2Q8TAA5 225 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 ARPC1AQ92747 370 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
TPM1-206ENST00000358278 OR51J1Q9H342 316 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 NSG2Q9Y328 171 aa12.06□□□□□ -0.48
TPM1-206ENST00000358278 A0A0G2JRQ6 117 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 HOXB5P09067 269 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 MAS1LP35410 378 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 NDPQ00604 133 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 OXA1LQ15070 435 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 MRGPRG-AS1Q2M3A8 158 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 KRTAP24-1Q3LI83 254 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 MINDY2Q8NBR6 621 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 COMMD5Q9GZQ3 224 aa12.05□□□□□ -0.48
TPM1-206ENST00000358278 COL6A5A8TX70 2615 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 C15orf61A6NNL5 157 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 AP4M1O00189 453 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 ATP6V0E1O15342 81 aa12.04□□□□□ -0.48
TPM1-206ENST00000358278 IL6RP08887 468 aaPredicted RBP12.04□□□□□ -0.48
TPM1-206ENST00000358278 P0C879 139 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms