RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 LOC102723971A0A1B0GUV8 181 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 C7orf77A4D0Y5 90 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 NDUFA2O43678 99 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 AKIRIN2Q53H80 203 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 ETV3LQ6ZN32 361 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 ZNF833PQ6ZTB9 187 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 RXFP4Q8TDU9 374 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 NPCDR1Q9BY65 106 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 RPS10P5Q9NQ39 176 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 ARFGEF3Q5TH69 2177 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 M0R036 132 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 DVL1O14640 695 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 SIAH2O43255 324 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 MBP02144 154 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 TFF3Q07654 80 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 RTL8BQ17RB0 113 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 ACSM6Q6P461 480 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 RPP25LQ8N5L8 163 aaKnown RBP16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 ZNRD1Q9P1U0 126 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 GNG13Q9P2W3 67 aa16.66■□□□□ 0.26
CHRNA3-202ENST00000348639 IGKV1D-33P01593 117 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 IGKV1-33P01594 117 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 SNRNP70P08621 437 aaKnown RBP16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 HNF4GQ14541 408 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 SLC35D1Q9NTN3 355 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 MAP1LC3B2A6NCE7 125 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 H7C2Y5 167 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 IL6RP08887 468 aaPredicted RBP16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 CD1BP29016 333 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 HOXA1P49639 335 aaPredicted RBP16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 HSPE1P61604 102 aaKnown RBP16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 RHEBQ15382 184 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 MUC15Q8N387 334 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 ZNF709Q8N972 641 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 OR10G4Q8NGN3 311 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 OR13D1Q8NGV5 346 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 RAB39BQ96DA2 213 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 GGACTQ9BVM4 153 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 MAP1LC3BQ9GZQ8 125 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 SLC39A9Q9NUM3 307 aa16.65■□□□□ 0.26
CHRNA3-202ENST00000348639 C17orf112F2Z3M2 114 aa16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 RRHO14718 337 aa16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 BCL2P10415 239 aa16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 PAX6P26367 422 aa16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 LOXP28300 417 aaPredicted RBP16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 FGF8P55075 233 aaPredicted RBP16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 PMS2P11Q13670 270 aa16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 WDR83OSQ9Y284 106 aa16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 ANKHD1Q8IWZ3 2542 aaKnown RBP16.64■□□□□ 0.25
CHRNA3-202ENST00000348639 IGKV1-16P04430 117 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 AKR1C3P42330 323 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 CYB561D1Q8N8Q1 229 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 C8orf31Q8N9H6 132 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 C20orf24Q9BUV8 137 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 PRORYQ9H606 182 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 LRBAP50851 2863 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 PRSS46E5RG02 174 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 FBP1P09467 338 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 ZNF672Q499Z4 452 aaPredicted RBP16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 FFAR4Q5NUL3 377 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 ABHD12Q8N2K0 398 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 ZNF596Q8TC21 504 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 PRNDQ9UKY0 176 aa16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 PUS1Q9Y606 427 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHRNA3-202ENST00000348639 ITPR1Q14643 2758 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 ZFP92A6NM28 416 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 DLX6P56179 175 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 RAB11AP62491 216 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 OR10G9Q8NGN4 311 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 OR10G7Q8NGN6 311 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 TMEM170AQ8WVE7 144 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 LHX4Q969G2 390 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 TUBA4BQ9H853 241 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 TET2Q6N021 2002 aaPredicted RBP16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 CTXND1A0A1B0GTU2 59 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 COLCA2A8K830 154 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 TMEM155Q4W5P6 130 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 LINC00311Q8N616 119 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 Q8N7P7 452 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 C15orf54Q8N8G6 183 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 MRPL20Q9BYC9 149 aaKnown RBP16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 ZNF257Q9Y2Q1 563 aa16.62■□□□□ 0.25
CHRNA3-202ENST00000348639 SRRM4A7MD48 611 aaKnown RBP16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 LYNX1G3V0Z9 82 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 H3BQ15 152 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 UPK2O00526 184 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 MPDU1O75352 247 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 LYNX1P0DP58 116 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 CEBPGP53567 150 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 DLK1P80370 383 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 ENY2Q9NPA8 101 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 OR51B2Q9Y5P1 312 aa16.61■□□□□ 0.25
CHRNA3-202ENST00000348639 J3QR06 171 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 FSTL3O95633 263 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 IFNA1P01562 189 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 APOA2P02652 100 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 SFTPCP11686 197 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 FAM71F2Q6NXP2 309 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 OR5AN1Q8NGI8 311 aa16.6■□□□□ 0.25
CHRNA3-202ENST00000348639 OSR1Q8TAX0 266 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms