RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 VKORC1L1Q8N0U8 176 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 DMBX1Q8NFW5 382 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 GLYATL2Q8WU03 294 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 CHPT1Q8WUD6 406 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 HSPB9Q9BQS6 159 aa12.15□□□□□ -0.46
SEC13-201ENST00000337354 ACTL6BO94805 426 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 CNIH1O95406 144 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 CA2P00918 260 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 TCRBP04435 133 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 MAS1LP35410 378 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 FXYD3Q14802 87 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 TRIM16LQ309B1 348 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 CLCC1Q96S66 551 aa12.14□□□□□ -0.47
SEC13-201ENST00000337354 ALX4Q9H161 411 aaPredicted RBP12.14□□□□□ -0.47
SEC13-201ENST00000337354 LINC01548A6NM66 108 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 SRPXP78539 464 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 TMEM267Q0VDI3 215 aaPredicted RBP12.13□□□□□ -0.47
SEC13-201ENST00000337354 MRGPRG-AS1Q2M3A8 158 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 CENPVQ7Z7K6 275 aaPredicted RBP12.13□□□□□ -0.47
SEC13-201ENST00000337354 STPG2Q8N412 459 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 IL22RA2Q969J5 263 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 SEC22AQ96IW7 307 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 TMEM68Q96MH6 324 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 TMEM56Q96MV1 263 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 ZNF430Q9H8G1 570 aaPredicted RBP12.13□□□□□ -0.47
SEC13-201ENST00000337354 PALMDQ9NP74 551 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 TPSG1Q9NRR2 321 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 TMEM140Q9NV12 185 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 TMEM56-RWDD3S4R434 201 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 STAB1Q9NY15 2570 aa12.13□□□□□ -0.47
SEC13-201ENST00000337354 UPK2O00526 184 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 IGKV1-39P01597 117 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 IGKV1D-39P04432 117 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 G6PCP35575 357 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 CRIP2P52943 208 aaPredicted RBP12.12□□□□□ -0.47
SEC13-201ENST00000337354 RPL8P62917 257 aaKnown RBP12.12□□□□□ -0.47
SEC13-201ENST00000337354 SUPT4H1P63272 117 aaKnown RBP12.12□□□□□ -0.47
SEC13-201ENST00000337354 SLC35B1P78383 322 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 PJVKQ0ZLH3 352 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 TMEM187Q14656 261 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 H2BFWTQ7Z2G1 175 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 ZNF695Q8IW36 515 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 DUSP18Q8NEJ0 188 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 ARPC1AQ92747 370 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 RBPMSQ93062 196 aaKnown RBP12.12□□□□□ -0.47
SEC13-201ENST00000337354 NUBP2Q9Y5Y2 271 aa12.12□□□□□ -0.47
SEC13-201ENST00000337354 ARPC1BO15143 372 aaKnown RBP12.11□□□□□ -0.47
SEC13-201ENST00000337354 ATP6V0E1O15342 81 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 SNAPC5O75971 98 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 HLA-GP17693 338 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 VDAC1P21796 283 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 GNB1P62873 340 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 TNXAQ16473 311 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 TMEM95Q3KNT9 176 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 FAM219AQ8IW50 185 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 LGI3Q8N145 548 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 COMMD1Q8N668 190 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 KLHDC1Q8N7A1 406 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 ENKURQ8TC29 256 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 RRNAD1Q96FB5 475 aaKnown RBP12.11□□□□□ -0.47
SEC13-201ENST00000337354 ZNF747Q9BV97 191 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 C20orf85Q9H1P6 137 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 FLVCR2Q9UPI3 526 aa12.11□□□□□ -0.47
SEC13-201ENST00000337354 PSMB11A5LHX3 300 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 SFT2D2O95562 160 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 OR4E1P0C645 316 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 EGR2P11161 476 aaPredicted RBP12.1□□□□□ -0.47
SEC13-201ENST00000337354 VAMP1P23763 118 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 MECP2P51608 486 aaKnown RBP12.1□□□□□ -0.47
SEC13-201ENST00000337354 AKR1C2P52895 323 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 PPP1R1AQ13522 171 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 SELENOHQ8IZQ5 122 aaKnown RBP12.1□□□□□ -0.47
SEC13-201ENST00000337354 WIPF2Q8TF74 440 aaPredicted RBP12.1□□□□□ -0.47
SEC13-201ENST00000337354 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 WFDC12Q8WWY7 111 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 NOL4LQ96MY1 436 aaPredicted RBP12.1□□□□□ -0.47
SEC13-201ENST00000337354 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
SEC13-201ENST00000337354 TRAV41A0A0B4J266 112 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 A0A0B4J2A0 478 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 MSGN1A6NI15 193 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 H2AFB2P0C5Z0 115 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 RAB25P57735 213 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
SEC13-201ENST00000337354 NDPQ00604 133 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 C4orf46Q504U0 113 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 TMEM268Q5VZI3 342 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 LRTM2Q8N967 370 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 OR5AU1Q8NGC0 362 aa12.09□□□□□ -0.47
SEC13-201ENST00000337354 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
SEC13-201ENST00000337354 LSM10Q969L4 123 aaKnown RBP12.09□□□□□ -0.47
SEC13-201ENST00000337354 COMMD5Q9GZQ3 224 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms