RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 C22orf46C9J442 243 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 H0YJW9 148 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 TEX46H3BTG2 121 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 I3L521 148 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 OVOL3O00110 214 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 RBMXL2O75526 392 aaKnown RBP9.66□□□□□ -0.86
TRIM40-205ENST00000307859 IGLV1-47P01700 117 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 APOA2P02652 100 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 ARG1P05089 322 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 ATP6V0CP27449 155 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 OR4A47Q6IF82 309 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 ZNF525Q8N782 197 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 OR13D1Q8NGV5 346 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 IGFBPL1Q8WX77 278 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 OR4C12Q96R67 309 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 TSNAXQ99598 290 aaKnown RBP9.66□□□□□ -0.86
TRIM40-205ENST00000307859 NABP2Q9BQ15 211 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 PARP11Q9NR21 331 aa9.66□□□□□ -0.86
TRIM40-205ENST00000307859 FOXA2Q9Y261 457 aaPredicted RBP9.66□□□□□ -0.86
TRIM40-205ENST00000307859 IGHV2-26A0A0B4J1V2 119 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 TRAV3A0A0B4J244 114 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 CEBPZOSA8MTT3 80 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 NUDT19A8MXV4 375 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 NDUFS7O75251 213 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 IGKV1-16P04430 117 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 LIPFP07098 398 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 IL3RAP26951 378 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 GPR6P46095 362 aaPredicted RBP9.65□□□□□ -0.86
TRIM40-205ENST00000307859 RAB5CP51148 216 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 GNB2P62879 340 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 BLOC1S1P78537 153 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 TMEM177Q53S58 311 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 PXDC1Q5TGL8 231 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 PDPNQ86YL7 162 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 BEND2Q8NDZ0 799 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 OSR1Q8TAX0 266 aaPredicted RBP9.65□□□□□ -0.86
TRIM40-205ENST00000307859 GNPNAT1Q96EK6 184 aaPredicted RBP9.65□□□□□ -0.86
TRIM40-205ENST00000307859 AIFM2Q9BRQ8 373 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 PCGF1Q9BSM1 259 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 SSBP3Q9BWW4 388 aaPredicted RBP9.65□□□□□ -0.86
TRIM40-205ENST00000307859 PARD6GQ9BYG4 376 aaPredicted RBP9.65□□□□□ -0.86
TRIM40-205ENST00000307859 TMEM14BQ9NUH8 114 aa9.65□□□□□ -0.86
TRIM40-205ENST00000307859 STRAPQ9Y3F4 350 aaKnown RBP9.65□□□□□ -0.86
TRIM40-205ENST00000307859 hCG_1809904A0A1W2PP81 198 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 A0A1W2PPE2 198 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 A0A1W2PR64 198 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 A0A1W2PRV1 198 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 RAB19A4D1S5 217 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 SCAF4O95104 1147 aaKnown RBP9.64□□□□□ -0.87
TRIM40-205ENST00000307859 IFNA17P01571 189 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 VDAC2P45880 294 aaPredicted RBP9.64□□□□□ -0.87
TRIM40-205ENST00000307859 TLE4Q04727 773 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 HLA-DRB5Q30154 266 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 LYPD6BQ8NI32 183 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 MARC2Q969Z3 335 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 CLEC7AQ9BXN2 247 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 MMP26Q9NRE1 261 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 BET1LQ9NYM9 111 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 C15orf62A8K5M9 175 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 TRIM77I1YAP6 450 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 IFNA5P01569 189 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 ZP3P21754 424 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 REG1BP48304 166 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 PRRX1P54821 245 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 KRTAP10-9P60411 292 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 DIAPH2-AS1Q14236 149 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 SPINK9Q5DT21 86 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 BTNL8Q6UX41 500 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 IL34Q6ZMJ4 242 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 Q6ZRG5 221 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 TGIF2LXQ8IUE1 241 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 PUSL1Q8N0Z8 303 aaKnown RBP9.64□□□□□ -0.87
TRIM40-205ENST00000307859 SPOCK3Q9BQ16 436 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 NUP50Q9UKX7 468 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 TCF19Q9Y242 345 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 WASHC3Q9Y3C0 194 aa9.64□□□□□ -0.87
TRIM40-205ENST00000307859 LOC105371242A0A075B767 164 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 SRRM4A7MD48 611 aaKnown RBP9.63□□□□□ -0.87
TRIM40-205ENST00000307859 UMAD1C9J7I0 102 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 M0R1W7 72 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 UPK2O00526 184 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 OR8U8P0C7N1 319 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 RAB13P51153 203 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 HSPE1P61604 102 aaKnown RBP9.63□□□□□ -0.87
TRIM40-205ENST00000307859 RUNX1Q01196 453 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 ATP6V1FQ16864 119 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 LRRC75BQ2VPJ9 315 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 UQCC3Q6UW78 93 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 LILRB2Q8N423 598 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 Q8N7P7 452 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 OR2G3Q8NGZ4 309 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 SPATA3Q8NHX4 192 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 HARBI1Q96MB7 349 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 PRNDQ9UKY0 176 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 ZNF257Q9Y2Q1 563 aa9.63□□□□□ -0.87
TRIM40-205ENST00000307859 NIPBLQ6KC79 2804 aaeCLIP9.62□□□□□ -0.87
TRIM40-205ENST00000307859 AKAP6Q13023 2319 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 KRBOX1C9JBD0 128 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms