RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TRIM16LQ309B1 348 aa17.85■□□□□ 0.45
LINC01116-201ENST00000295549 ARSJQ5FYB0 599 aaPredicted RBP17.85■□□□□ 0.45
LINC01116-201ENST00000295549 ENKURQ8TC29 256 aa17.85■□□□□ 0.45
LINC01116-201ENST00000295549 TMEM56Q96MV1 263 aa17.85■□□□□ 0.45
LINC01116-201ENST00000295549 CLCC1Q96S66 551 aa17.85■□□□□ 0.45
LINC01116-201ENST00000295549 ALX4Q9H161 411 aaPredicted RBP17.85■□□□□ 0.45
LINC01116-201ENST00000295549 OR51J1Q9H342 316 aa17.85■□□□□ 0.45
LINC01116-201ENST00000295549 TMEM140Q9NV12 185 aa17.85■□□□□ 0.45
LINC01116-201ENST00000295549 RNF114Q9Y508 228 aa17.85■□□□□ 0.45
LINC01116-201ENST00000295549 TMEM56-RWDD3S4R434 201 aa17.85■□□□□ 0.45
LINC01116-201ENST00000295549 LINC01548A6NM66 108 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 ATG12O94817 140 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 CA2P00918 260 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 FGF2P09038 288 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 G6PCP35575 357 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 NRARPQ7Z6K4 114 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 MMD2Q8IY49 270 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 ZNF430Q9H8G1 570 aaPredicted RBP17.84■□□□□ 0.45
LINC01116-201ENST00000295549 NUDT15Q9NV35 164 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 ZNF580Q9UK33 172 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 NUBP2Q9Y5Y2 271 aa17.84■□□□□ 0.45
LINC01116-201ENST00000295549 AP4M1O00189 453 aa17.83■□□□□ 0.45
LINC01116-201ENST00000295549 IGF1P05019 195 aa17.83■□□□□ 0.45
LINC01116-201ENST00000295549 PPP1R1AQ13522 171 aa17.83■□□□□ 0.45
LINC01116-201ENST00000295549 TMEM95Q3KNT9 176 aa17.83■□□□□ 0.45
LINC01116-201ENST00000295549 AWAT1Q58HT5 328 aa17.83■□□□□ 0.45
LINC01116-201ENST00000295549 FOXRED2Q8IWF2 684 aa17.83■□□□□ 0.45
LINC01116-201ENST00000295549 ANXA7P20073 488 aaKnown RBP17.82■□□□□ 0.44
LINC01116-201ENST00000295549 VAMP1P23763 118 aa17.82■□□□□ 0.44
LINC01116-201ENST00000295549 PROK1P58294 105 aa17.82■□□□□ 0.44
LINC01116-201ENST00000295549 SSBP2P81877 361 aaPredicted RBP17.82■□□□□ 0.44
LINC01116-201ENST00000295549 LHFPL5Q8TAF8 219 aa17.82■□□□□ 0.44
LINC01116-201ENST00000295549 RBPMSQ93062 196 aaKnown RBP17.82■□□□□ 0.44
LINC01116-201ENST00000295549 IL22RA2Q969J5 263 aa17.82■□□□□ 0.44
LINC01116-201ENST00000295549 WNT10AQ9GZT5 417 aa17.82■□□□□ 0.44
LINC01116-201ENST00000295549 TRAV6A0A075B6T7 132 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 UPK2O00526 184 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 SFT2D2O95562 160 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 H2AFB2P0C5Z0 115 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 OR4E1P0C645 316 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 MAS1LP35410 378 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 MECP2P51608 486 aaKnown RBP17.81■□□□□ 0.44
LINC01116-201ENST00000295549 RPL8P62917 257 aaKnown RBP17.81■□□□□ 0.44
LINC01116-201ENST00000295549 SRPXP78539 464 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 NDPQ00604 133 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 DCTN2Q13561 401 aaKnown RBP17.81■□□□□ 0.44
LINC01116-201ENST00000295549 FXYD3Q14802 87 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 ZNF695Q8IW36 515 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 SELENOHQ8IZQ5 122 aaKnown RBP17.81■□□□□ 0.44
LINC01116-201ENST00000295549 MDFIQ99750 246 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 PIGBOS1A0A0B4J2F0 54 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 CNIH1O95406 144 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 IGKV1-5P01602 117 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 H2BFWTQ7Z2G1 175 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 ARPC1AQ92747 370 aa17.81■□□□□ 0.44
LINC01116-201ENST00000295549 TNCP24821 2201 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 TRAV3A0A0B4J244 114 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 C9orf170A2RU37 121 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 ATP6V0E1O15342 81 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 PLXNB1O43157 2135 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 ACTL6BO94805 426 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 P0C879 139 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 EGR2P11161 476 aaPredicted RBP17.8■□□□□ 0.44
LINC01116-201ENST00000295549 AKR1C2P52895 323 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 CRIP2P52943 208 aaPredicted RBP17.8■□□□□ 0.44
LINC01116-201ENST00000295549 GNB1P62873 340 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 DHRS2Q13268 280 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 TNXAQ16473 311 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 TMEM268Q5VZI3 342 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 LGI3Q8N145 548 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 STPG2Q8N412 459 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 LRTM2Q8N967 370 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 CHPT1Q8WUD6 406 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 NOL4LQ96MY1 436 aaPredicted RBP17.8■□□□□ 0.44
LINC01116-201ENST00000295549 PARP11Q9NR21 331 aa17.8■□□□□ 0.44
LINC01116-201ENST00000295549 HLA-AP01891 365 aaKnown RBP17.79■□□□□ 0.44
LINC01116-201ENST00000295549 HLA-GP17693 338 aa17.79■□□□□ 0.44
LINC01116-201ENST00000295549 C4orf46Q504U0 113 aa17.79■□□□□ 0.44
LINC01116-201ENST00000295549 LYG2Q86SG7 212 aa17.79■□□□□ 0.44
LINC01116-201ENST00000295549 FAM219AQ8IW50 185 aa17.79■□□□□ 0.44
LINC01116-201ENST00000295549 SGMS2Q8NHU3 365 aa17.79■□□□□ 0.44
LINC01116-201ENST00000295549 WIPF2Q8TF74 440 aaPredicted RBP17.79■□□□□ 0.44
LINC01116-201ENST00000295549 RRNAD1Q96FB5 475 aaKnown RBP17.79■□□□□ 0.44
LINC01116-201ENST00000295549 GON7Q9BXV9 100 aa17.79■□□□□ 0.44
LINC01116-201ENST00000295549 PRR13Q9NZ81 148 aa17.79■□□□□ 0.44
LINC01116-201ENST00000295549 A0A0B4J2A0 478 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 SNAPC5O75971 98 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 OR9G9P0C7N8 305 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 ANKRD55Q3KP44 614 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 PLET1Q6UQ28 207 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 KLHDC1Q8N7A1 406 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 LSM10Q969L4 123 aaKnown RBP17.78■□□□□ 0.44
LINC01116-201ENST00000295549 SHPKQ9UHJ6 478 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 LINC00527Q9UJ94 153 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 FBXO7Q9Y3I1 522 aa17.78■□□□□ 0.44
LINC01116-201ENST00000295549 DUS4LO95620 317 aaKnown RBP17.77■□□□□ 0.44
LINC01116-201ENST00000295549 PTTG1O95997 202 aa17.77■□□□□ 0.44
LINC01116-201ENST00000295549 TMEM267Q0VDI3 215 aaPredicted RBP17.77■□□□□ 0.44
LINC01116-201ENST00000295549 AKIRIN2Q53H80 203 aa17.77■□□□□ 0.44
LINC01116-201ENST00000295549 SLC35G3Q8N808 338 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms