RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 DMRTA2Q96SC8 542 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 F12P00748 615 aaPredicted RBP11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 ERVK11-1P61568 191 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 HEPN1Q6WQI6 88 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 FBXL15Q9H469 300 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 K7EQM0 130 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 C1QL1O75973 258 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 HNF1AP20823 631 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 DUTP33316 252 aaKnown RBP11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 PLA2G5P39877 138 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 RAB5BP61020 215 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 KRTAP27-1Q3LI81 207 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 COMMD1Q8N668 190 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 GATA4P43694 442 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 CSN1S1P47710 185 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 HERPUD1Q15011 391 aa11.99□□□□□ -0.49
PDLIM2-201ENST00000265810 OR2T10Q8NGZ9 312 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 SLC45A2Q9UMX9 530 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 URGCP-MRPS24S4R325 110 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 OR10J4P0C629 311 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 SMIM8Q96KF7 97 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 IGKV1D-33P01593 117 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 IGKV1-33P01594 117 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 CD24P25063 80 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 SP5Q6BEB4 398 aaPredicted RBP11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 PDPNQ86YL7 162 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 C18orf12Q96KH6 178 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 TIMM9Q9Y5J7 89 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 YLPM1P49750 1951 aaKnown RBP11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 ZNF737O75373 536 aa11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 FGF23Q9GZV9 251 aaPredicted RBP11.98□□□□□ -0.49
PDLIM2-201ENST00000265810 TRAV14DV4A0A0A6YYC5 116 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 WIPF3A6NGB9 483 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 C1orf196B1AJZ1 125 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 IGHV3-48P01763 117 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 MT-ND4LP03901 98 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 LMO1P25800 156 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 OR1L4Q8NGR5 311 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 A6NNC1 897 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 RPS10P46783 165 aaKnown RBP11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 DVL1P1P54792 670 aaPredicted RBP11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 ADORA2A-AS1P86434 159 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 KIAA0141Q14154 515 aaPredicted RBP11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 DUX4L9Q6RFH8 374 aaPredicted RBP11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 OR4X1Q8NH49 305 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 AUP1Q9Y679 476 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 IGKV1-6A0A0C4DH72 117 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 SFTA3P0C7M3 94 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 ZNF525Q8N782 197 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 OR4P4Q8NGL7 312 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 BLNKQ8WV28 456 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
PDLIM2-201ENST00000265810 IGSF23A1L1A6 192 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 ZNF785A8K8V0 405 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 SHISA9B4DS77 424 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 IGHV1-8P0DP01 117 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 OR10J1P30954 320 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 CCKARP32238 428 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 RPL30P62888 115 aaKnown RBP11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 IFITM2Q01629 132 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 FXYD3Q14802 87 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 Q6ZS49 121 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 NKX6-2Q9C056 277 aaPredicted RBP11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 IFT22Q9H7X7 185 aa11.96□□□□□ -0.49
PDLIM2-201ENST00000265810 TIGITQ495A1 244 aa11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 DNM1P46Q6ZS02 220 aa11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 BPESC1Q9GZL8 116 aa11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 PTPN13Q12923 2485 aa11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 COL5A1P20908 1838 aaPredicted RBP11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 LINC00205P59089 165 aa11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 KCNIP4Q6PIL6 250 aa11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 C15orf54Q8N8G6 183 aa11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 TAF15Q92804 592 aaKnown RBP eCLIP11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 MBNL3Q9NUK0 354 aaKnown RBP11.96□□□□□ -0.5
PDLIM2-201ENST00000265810 SLC31A2O15432 143 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 LAMTOR1Q6IAA8 161 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 UQCC3Q6UW78 93 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 CLEC3BP05452 202 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 Q8TCH9 128 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 RNF126Q9BV68 326 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 PITPNC1Q9UKF7 332 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 TNRC6AQ8NDV7 1962 aaKnown RBP11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 H0YIZ8 118 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 SCO1O75880 301 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 EFNB3Q15768 340 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 TMEM41BQ5BJD5 291 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 OR5B3Q8NH48 314 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 LHFPL5Q8TAF8 219 aa11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 TIMM8BQ9Y5J9 83 aaPredicted RBP11.95□□□□□ -0.5
PDLIM2-201ENST00000265810 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 RND2P52198 227 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 SERF2P84101 59 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 OR4F17Q8NGA8 305 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 Q8WTZ3 238 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 SMCO4Q9NRQ5 59 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 RAB19A4D1S5 217 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 RBFOX3A6NFN3 312 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 NMBP08949 121 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms