RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Prr19B2RW88 366 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm43517E9PYS1 339 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Pira2F8VQ94 680 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Fabp4P04117 132 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Ifna7P06799 190 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Tnfrsf9P20334 256 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 H3f3aP84244 136 aaKnown RBP6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Vmn1r181Q0P547 304 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Lrrc30Q3UV48 300 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 PiglQ5SX19 252 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Tle4Q62441 773 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Oxgr1Q6IYF8 337 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Utf1Q6J1H4 339 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Olfr1341Q7TQV4 312 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gpr84Q8CIM5 396 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Cd226Q8K4F0 333 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Tmem54Q9D7S1 219 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Prss21Q9JHJ7 324 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Olfr1097A2AVA9 315 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Scgb1b29D2XZ31 93 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Scgb1b20E9PWZ2 93 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm20918J3QN17 227 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 C1ql1O88992 258 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Ifna2P01573 190 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Pcp4P63054 62 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Cstl1Q80Y72 140 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Slc25a41Q8BVN7 312 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Ssxb2Q8C5Z3 165 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Zfp87Q8K2A4 540 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Olfr1475Q8VEV6 314 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Olfr980Q8VH08 310 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Cela3bQ9CQ52 269 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 D730048I06RikQ9CQB8 106 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Hint2Q9D0S9 163 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Q9D9C7 252 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Ergic1Q9DC16 290 aaKnown RBP6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Plekha2Q9ERS5 425 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Prss30Q9QYZ9 310 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Mnx1Q9QZW9 404 aa6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Timm9Q9WV98 89 aaKnown RBP6.5□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Mrgpra9A0A140T8U8 332 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Ankrd65F6YK91 380 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Smr2O09133 150 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Hmgb3O54879 200 aaKnown RBP6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Fpr2O88536 351 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 SrcP05480 541 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Jmjd7P0C872 316 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Ccr2P51683 373 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Tcl1b1P56840 116 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Ube2nP61089 152 aaKnown RBP6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Rab1AP62821 205 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Arg1Q61176 323 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm21093Q6GQS8 569 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Q8BTG6 205 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Vmn1r4Q8R2D3 297 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 MrgprfQ8VCJ6 343 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Olfr720Q8VF37 316 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Olfr916Q8VG53 310 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Rpusd4Q9CWX4 377 aaKnown RBP6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Pdzd11Q9CZG9 140 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gkn3Q9D0T7 191 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Rbfox1Q9JJ43 396 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Elovl1Q9JLJ5 279 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Cep295Q8BQ48 2412 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Sdk2Q6V4S5 2176 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 2410004P03RikA0A087WQY2 205 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Olfr588-ps1A0A1B0GSZ2 313 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 A0A286YCQ8 80 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Bcl2P10417 236 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Wnt5bP22726 359 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Rab19P35294 217 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Lbx1P52955 282 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Mr1Q8HWB0 341 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Vmn1r235Q8R297 328 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Neurl1Q923S6 574 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Abhd12Q99LR1 398 aaKnown RBP6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gins3Q9CY94 216 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 CutcQ9D8X1 272 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Wnk2Q3UH66 2149 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm29049A0A087WSM5 227 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Zfp764E9QAP1 431 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm21788J3QNH3 180 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm21118J3QPK8 227 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 DdtO35215 118 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 MdkP12025 140 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Nutf2P61971 127 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 CluQ06890 448 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Prrc1Q3UPH1 443 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Defb28Q3V2L0 89 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Q504N7 393 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Slc7a15Q50E62 488 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm20909Q5FWB5 227 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm20852Q5M8R5 227 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 CybaQ61462 192 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm20917Q62457 227 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm20809Q62458 227 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm20865Q62460 227 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Btn1a1Q62556 524 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Gm20738Q810R8 227 aa6.49□□□□□ -1.37
Bdnf-207ENSMUST00000111047 Lpar6Q8BMC0 344 aa6.49□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms