RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Kcnip1Q9JJ57 227 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ndufa7Q9Z1P6 113 aaKnown RBP11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm28870A0A0A6YW38 222 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Trbv29A0A0G2LB96 114 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1191-ps1A0A1L1STD5 311 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Slc25a53A2AF28 346 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm4950D3YUM8 205 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 BC048679D3YXE9 172 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm17669F6QL70 154 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Igk-V19-17P01633 149 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 P01798 113 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Igh-3P01867 404 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Hist1h1bP43276 223 aaKnown RBP11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Defb46Q4QY34 57 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr1042Q7TR81 313 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm10600Q8BQ57 223 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Sulf2Q8CFG0 875 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ntng2Q8R4F1 589 aaKnown RBP11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Defb7Q91V70 71 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rbmxl1Q91VM5 388 aaKnown RBP11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Osr2Q91ZD1 312 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Slc29a3Q99P65 475 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Mrpl49Q9CQ40 166 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Ube2j1Q9JJZ4 318 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Syt7Q9R0N7 403 aa11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 Tagln2Q9WVA4 199 aaKnown RBP11.1□□□□□ -0.63
Nup88-203ENSMUST00000108531 SvilQ8K4L3 2170 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Dchs2A0A0A6YW72 3346 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm37240E9QAY5 252 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr64F8VPZ8 307 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr417F8VQB1 309 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 FusP56959 518 aaKnown RBP11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 C1ql4Q4ZJM9 238 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 OpalinQ7M750 143 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Cdk3Q80YP0 303 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rnf170Q8CBG9 286 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Trib3Q8K4K2 354 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Rnf126Q91YL2 313 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Mmp24Q9R0S2 618 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Igkv13-85A0A075B666 115 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Trav6d-5A0A075B6B9 112 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Lpar5Q149R9 372 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Fbxo7Q3U7U3 523 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gm5127Q3UQH6 212 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Trav8d-2Q5R1B6 112 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Gpank1Q61858 372 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 S100a15aQ6S5I3 108 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Srsf7Q8BL97 267 aaKnown RBP11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Degs2Q8R2F2 323 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Olfr803Q8VFI3 308 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Msmo1Q9CRA4 293 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 ManbalQ9D8X0 85 aa11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Eif2s3xQ9Z0N1 472 aaKnown RBP11.09□□□□□ -0.63
Nup88-203ENSMUST00000108531 Tcrg-C4A0A075B6C7 190 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ighv1-47A0A0A6YY41 117 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ctxnd2A0A1B0GQX3 59 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr102B2RT33 308 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tgfbr3lD3YZZ2 297 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm6460F6YJZ8 199 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 2010315B03RikJ3QK55 433 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm5039J3QNT6 144 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 PtcraP0C6B2 199 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 CortP56469 109 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Fgf12P61329 243 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cd84Q18PI6 329 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Slc25a26Q5U680 274 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Foxl1Q64731 336 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1137Q7TR40 310 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rab39bQ8BHC1 213 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cpne4Q8BLR2 557 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ssxb2Q8C5Z3 165 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr101Q920Z0 308 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr632Q9EPN9 317 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm36864A0A1Y7VJE6 447 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1220F7BL62 311 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Pfdn2O70591 154 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 GzmaP11032 260 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Prkar2aP12367 401 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Hnf1aP22361 628 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cks2P56390 79 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Slc34a1Q60825 637 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Nmes1Q810Q5 83 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Acsm5Q8BGA8 578 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Txnl1Q8CDN6 289 aaKnown RBP11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 B4galt7Q8R087 327 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tlcd2Q8VC26 310 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 MrgprfQ8VCJ6 343 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1420Q8VF55 309 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr156Q8VGA9 318 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr829Q8VGX1 321 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Zmat5Q9CQR5 170 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Samt4Q9D4X6 233 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ndufb8Q9D6J5 186 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ascl3Q9JJR7 174 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Slc25a10Q9QZD8 287 aa11.08□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm39566A0A1B0GT45 1251 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm16519F8VQK7 162 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Phlda2O08969 144 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Srsf5O35326 269 aaKnown RBP11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 PpicP30412 212 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms