RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SGPP2Q8IWX5 399 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.74□□□□□ -0.53
LINC00339-208ENST00000634934 NANPQ8TBE9 248 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 ZNF596Q8TC21 504 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 MS4A7Q9GZW8 240 aaPredicted RBP11.74□□□□□ -0.53
LINC00339-208ENST00000634934 TOLLIPQ9H0E2 274 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
LINC00339-208ENST00000634934 FN1P02751 2386 aaKnown RBP11.73□□□□□ -0.53
LINC00339-208ENST00000634934 IGHV1-69DA0A0B4J2H0 117 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 INAFM1C9JVW0 142 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 SNAPINO95295 136 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 IFNA21P01568 189 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 RAB7AP51149 207 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 LGALS4P56470 323 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 KLF17Q5JT82 389 aaPredicted RBP11.73□□□□□ -0.53
LINC00339-208ENST00000634934 FAM120AOSQ5T036 256 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 RUSC1-AS1Q66K80 236 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 ATRAIDQ6UW56 229 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 BRD3OSQ6XYD6 125 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 IL17RELQ6ZVW7 336 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 FAM71E2Q8N5Q1 922 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 C8orf31Q8N9H6 132 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 UBAC2Q8NBM4 344 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 TOMM40LQ969M1 308 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 ABHD14BQ96IU4 210 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 OR10C1Q96KK4 312 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 TSNAXQ99598 290 aaKnown RBP11.73□□□□□ -0.53
LINC00339-208ENST00000634934 PRELID3BQ9Y3B1 194 aa11.73□□□□□ -0.53
LINC00339-208ENST00000634934 IGKV1D-13A0A0B4J2D9 117 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 ODF3BA8MYP8 253 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 NPFFO15130 113 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 DEDDO75618 318 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 TSPAN9O75954 239 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 IGLV1-47P01700 117 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 IGKV1-13P0DP09 117 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 HKR1P10072 659 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 RAB32Q13637 225 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 LINC00311Q8N616 119 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 OR4P4Q8NGL7 312 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 SECTM1Q8WVN6 248 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 OR2D2Q9H210 308 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
LINC00339-208ENST00000634934 HIVEP2P31629 2446 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 BUB1B-PAK6H3BSN5 160 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 ITGB1BP1O14713 200 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 ADAP1O75689 374 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 CD5P06127 495 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 HNF1AP20823 631 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 IL3RAP26951 378 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 HTR1DP28221 377 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 SRP14P37108 136 aaKnown RBP11.71□□□□□ -0.53
LINC00339-208ENST00000634934 GPR12P47775 334 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 DEFA5Q01523 94 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 SMCO1Q147U7 214 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 SLC9A3R2Q15599 337 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 LHFPL4Q7Z7J7 247 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 TEX29Q8N6K0 151 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 MOB3AQ96BX8 217 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 AGMATQ9BSE5 352 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 IFI27L2Q9H2X8 130 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 UQCC1Q9NVA1 299 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 KCNIP3Q9Y2W7 256 aa11.71□□□□□ -0.53
LINC00339-208ENST00000634934 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.53
LINC00339-208ENST00000634934 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 MSGN1A6NI15 193 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 HSD17B6O14756 317 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 EPHA1P21709 976 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 SAA4P35542 130 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 RAB5CP51148 216 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 F2RL1P55085 397 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 SRPXP78539 464 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 MIDNQ504T8 468 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 BTNL8Q6UX41 500 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 LDLRAD3Q86YD5 345 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 PUSL1Q8N0Z8 303 aaKnown RBP11.7□□□□□ -0.54
LINC00339-208ENST00000634934 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 TMED6Q8WW62 240 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 DPM3Q9P2X0 92 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 SAA2-SAA4A0A096LPE2 208 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 E5RGE8 158 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 RAB29O14966 203 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 FSHBP01225 129 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 SEC11BP0C7V7 166 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 SAA2P0DJI9 122 aaPredicted RBP11.7□□□□□ -0.54
LINC00339-208ENST00000634934 ADCYAP1P18509 176 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 GUCA2BQ16661 112 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 RPL39P5Q59GN2 51 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 RPEQ96AT9 228 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 NARS2Q96I59 477 aaKnown RBP11.7□□□□□ -0.54
LINC00339-208ENST00000634934 S1PR3Q99500 378 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 CCL28Q9NRJ3 127 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 NSG2Q9Y328 171 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 TBL2Q9Y4P3 447 aaKnown RBP11.7□□□□□ -0.54
LINC00339-208ENST00000634934 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
LINC00339-208ENST00000634934 DUXBA0A1W2PPF3 345 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms