RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 NHLH2Q02577 135 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 PAX2Q02962 417 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 STPG2Q8N412 459 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 PNKDQ8N490 385 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 OR5AN1Q8NGI8 311 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 FAM168AQ92567 244 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 SIRT7Q9NRC8 400 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 LYRM2Q9NU23 88 aaPredicted RBP14.65□□□□□ -0.06
COMMD4-208ENST00000563220 TACC2O95359 2948 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 CRYBG3Q68DQ2 2970 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 TRAV3A0A0B4J244 114 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 IGSF23A1L1A6 192 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 FAM90A26D6RGX4 464 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 CAV2P51636 162 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 TNFRSF9Q07011 255 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 BEND2Q8NDZ0 799 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 C10orf105Q8TEF2 133 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 SMIM3Q9BZL3 60 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 MMP26Q9NRE1 261 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 TMEM140Q9NV12 185 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 HSPB7Q9UBY9 170 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 FBXL17Q9UF56 701 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 SRRM4A7MD48 611 aaKnown RBP14.64□□□□□ -0.07
COMMD4-208ENST00000563220 BUB1B-PAK6H3BSN5 160 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 J3QKU1 62 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 IAPPP10997 89 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 UBE2KP61086 200 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 ERVK-16P61578 105 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 RTL8BQ17RB0 113 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 TMEM252Q8N6L7 170 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 OR4P4Q8NGL7 312 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 OR13D1Q8NGV5 346 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 PERPQ96FX8 193 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 RHOVQ96L33 236 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 RAB40CQ96S21 281 aa14.64□□□□□ -0.07
COMMD4-208ENST00000563220 ASH1LQ9NR48 2969 aaKnown RBP14.64□□□□□ -0.07
COMMD4-208ENST00000563220 VWC2LB2RUY7 222 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 FGF16O43320 207 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 TPT1P13693 172 aaKnown RBP14.63□□□□□ -0.07
COMMD4-208ENST00000563220 PRTN3P24158 256 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 IL3RAP26951 378 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 EWSR1Q01844 656 aaKnown RBP eCLIP14.63□□□□□ -0.07
COMMD4-208ENST00000563220 FAM74A1Q5RGS3 127 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 HCP5Q6MZN7 132 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 UQCC3Q6UW78 93 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 TGIF2LXQ8IUE1 241 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 PIMREGQ9BSJ6 248 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 QTRT1Q9BXR0 403 aaKnown RBP14.63□□□□□ -0.07
COMMD4-208ENST00000563220 RBKSQ9H477 322 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 WFDC1Q9HC57 220 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 MED13LQ71F56 2210 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 FAM90A9PA6NNJ1 464 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 TAAR5O14804 337 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 ENSAO43768 121 aaKnown RBP14.63□□□□□ -0.07
COMMD4-208ENST00000563220 RBMXL2O75526 392 aaKnown RBP14.63□□□□□ -0.07
COMMD4-208ENST00000563220 OR2B8PP59922 312 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 RELBQ01201 579 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 RPL7L1Q6DKI1 246 aaKnown RBP14.63□□□□□ -0.07
COMMD4-208ENST00000563220 C1orf122Q6ZSJ8 110 aa14.63□□□□□ -0.07
COMMD4-208ENST00000563220 IGHV4-61A0A0C4DH41 118 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 RAB19A4D1S5 217 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 H3BP45 60 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 APOA2P02652 100 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 KRTAP10-9P60411 292 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 KLRD1Q13241 179 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 POU2AF1Q16633 256 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 AARDQ4LEZ3 155 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 LDLRAD2Q5SZI1 272 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 ZNF787Q6DD87 383 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 DHRS7BQ6IAN0 325 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-208ENST00000563220 OR4A47Q6IF82 309 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 OR11H6Q8NGC7 330 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 SMIM8Q96KF7 97 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 WSB1Q9Y6I7 421 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 FBN2P35556 2912 aa14.62□□□□□ -0.07
COMMD4-208ENST00000563220 IGHV4-30-2A0A087WSY4 118 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 IGHV2-70DA0A0C4DH43 119 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 H7C2Y5 167 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 NDUFS8O00217 210 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 TXNL1O43396 289 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 HRASP01112 189 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 PAX1P15863 534 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 ARHGDIBP52566 201 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 RPL23AP62750 156 aaKnown RBP14.61□□□□□ -0.07
COMMD4-208ENST00000563220 CLEC2AQ6UVW9 174 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 BAP18Q8IXM2 172 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 KIR3DL3Q8N743 410 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 OR4A16Q8NH70 328 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 PCGF1Q9BSM1 259 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 SLC25A31Q9H0C2 315 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 PSENENQ9NZ42 101 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 USP9YO00507 2555 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-208ENST00000563220 NUDT19A8MXV4 375 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 FAM157AC9JC47 383 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 LY6LH3BQJ8 138 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 IL6RP08887 468 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-208ENST00000563220 SPINK9Q5DT21 86 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 VMO1Q7Z5L0 202 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 LHX4Q969G2 390 aa14.61□□□□□ -0.07
COMMD4-208ENST00000563220 ZDHHC16Q969W1 377 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms