RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 SVEP1Q4LDE5 3571 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 DSCAML1Q8TD84 2053 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 IGHV1-69-2A0A0G2JMI3 117 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 SMAD7O15105 426 aaKnown RBP13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 UBE2KP61086 200 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 C10orf91Q5T1B1 145 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 FAM122CQ6P4D5 195 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 LRRC75A-AS1Q8N1F1 130 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 FAM216BQ8N7L0 139 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 RAB9BQ9NP90 201 aa13.61□□□□□ -0.23
CHMP1A-204ENST00000547687 PPIAL4EA0A075B759 164 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 TRAV38-1A0A0B4J264 116 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 PPIAL4DF5H284 164 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 CD5P06127 495 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 PPIAL4FP0DN26 164 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 DVL1P1P54792 670 aaPredicted RBP13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 C17orf58Q2M2W7 97 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 COMMD1Q8N668 190 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 FAM213BQ8TBF2 198 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 PPIAL4AQ9Y536 164 aa13.6□□□□□ -0.23
CHMP1A-204ENST00000547687 UMAD1C9J7I0 102 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 OVOL3O00110 214 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 RAB29O14966 203 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 PROP1O75360 226 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 CR1P17927 2039 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 DUTP33316 252 aaKnown RBP13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 SNCAP37840 140 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 PPOXP50336 477 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 TNFRSF9Q07011 255 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 NCR3LG1Q68D85 454 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 H2BFWTQ7Z2G1 175 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 SVBPQ8N300 66 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 CD300LFQ8TDQ1 290 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 SEC11CQ9BY50 192 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 NKX6-2Q9C056 277 aaPredicted RBP13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 FAM234AQ9H0X4 552 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 RBKSQ9H477 322 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 CBLN4Q9NTU7 201 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 HSPB7Q9UBY9 170 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 CARHSP1Q9Y2V2 147 aaKnown RBP13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 NAV3Q8IVL0 2385 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 TRGV10A0A0A0MS01 117 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 KBTBD11-OT1A0A1B0GTJ5 212 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 TMPRSS2O15393 492 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 IFNA5P01569 189 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 IGHV3-7P01780 117 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 METTL15P1P0C7V9 234 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 ZNF134P52741 427 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 SPANXN5Q5MJ07 72 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 CLN8Q9UBY8 286 aa13.59□□□□□ -0.23
CHMP1A-204ENST00000547687 LYNX1G3V0Z9 82 aa13.58□□□□□ -0.24
CHMP1A-204ENST00000547687 LYNX1P0DP58 116 aa13.58□□□□□ -0.24
CHMP1A-204ENST00000547687 C11orf71Q6IPW1 123 aa13.58□□□□□ -0.24
CHMP1A-204ENST00000547687 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
CHMP1A-204ENST00000547687 M0R1X1 148 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 IGHV4-39P01824 125 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 COL8A2P25067 703 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 RUNX1Q01196 453 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 ARL16Q0P5N6 197 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 HFEQ30201 348 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 SLC25A24Q6NUK1 477 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 MAPK1IP1LQ8NDC0 245 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 GFOD1Q9NXC2 390 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 C9JQL5 133 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 ITGB1BP1O14713 200 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 FCGR3BO75015 233 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 SFTA3P0C7M3 94 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 HBG1P69891 147 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 HBG2P69892 147 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 RPL39P5Q59GN2 51 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 DTX2Q86UW9 622 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 PUSL1Q8N0Z8 303 aaKnown RBP13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 ABHD14AQ9BUJ0 271 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 IFI27L2Q9H2X8 130 aa13.57□□□□□ -0.24
CHMP1A-204ENST00000547687 ABCA2Q9BZC7 2435 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 NKX6-3A6NJ46 265 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 TSPAN4O14817 238 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 SLC31A2O15432 143 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 NUPL2O15504 423 aaKnown RBP13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 RAB7AP51149 207 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 ZNF273Q14593 569 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 PEA15Q15121 130 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 GUK1Q16774 197 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 HAPLN4Q86UW8 402 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 THNSL2Q86YJ6 484 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 SCGB1C1Q8TD33 95 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 LEAP2Q969E1 77 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 R3HDM4Q96D70 268 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 GAB2Q9UQC2 676 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 ABCA1O95477 2261 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 MARCH11A6NNE9 402 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 DNASE2O00115 360 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 TNFRSF13BO14836 293 aaPredicted RBP13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 LY6HO94772 140 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 HPRT1P00492 218 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 PAX1P15863 534 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 CT45A1Q5HYN5 189 aa13.56□□□□□ -0.24
CHMP1A-204ENST00000547687 UTF1Q5T230 341 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms