RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SLC25A32Q9H2D1 315 aa9.96□□□□□ -0.82
AP003559.1-201ENST00000540906 GCN1Q92616 2671 aaKnown RBP9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 FAM90A26D6RGX4 464 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 GPR37O15354 613 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 FGF16O43320 207 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 ATG12O94817 140 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 RRASP10301 218 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 COL8A1P27658 744 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 ZNF137PP52743 207 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 RPL23AP62750 156 aaKnown RBP9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 AARDQ4LEZ3 155 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 SPANXN5Q5MJ07 72 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 HCP5Q6MZN7 132 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 UBAC2Q8NBM4 344 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 HSD17B11Q8NBQ5 300 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 OR13D1Q8NGV5 346 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 RHOVQ96L33 236 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 SPOCK3Q9BQ16 436 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 GINS3Q9BRX5 216 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 SLC25A31Q9H0C2 315 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 SIRT7Q9NRC8 400 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 WSB1Q9Y6I7 421 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
AP003559.1-201ENST00000540906 MED13LQ71F56 2210 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 LOC105371242A0A075B767 164 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 IGHV3-72A0A0B4J1Y9 119 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 RBMXL2O75526 392 aaKnown RBP9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 IGHV2-5P01817 119 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 LIPFP07098 398 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 IL6RP08887 468 aaPredicted RBP9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 PAX6P26367 422 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 SULT1A1P50225 295 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 HLA-DRB5Q30154 266 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 TMEM14EPQ6UXP3 125 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 PDZD9Q8IXQ8 264 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 PNKDQ8N490 385 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 OR5AN1Q8NGI8 311 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 DTD1Q8TEA8 209 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 ITGB1BP2Q9UKP3 347 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 TACC2O95359 2948 aa9.94□□□□□ -0.82
AP003559.1-201ENST00000540906 PMS2P5A8MQ11 134 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 JTBO76095 146 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 ERVK-16P61578 105 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 LMO4P61968 165 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 RUNX1Q01196 453 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 POU2AF1Q16633 256 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 OR4P4Q8NGL7 312 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 OR1S2Q8NGQ3 325 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 CLDND2Q8NHS1 167 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 RAB39BQ96DA2 213 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 CCL19Q99731 98 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 CLEC7AQ9BXN2 247 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 MMP26Q9NRE1 261 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 ABCA2Q9BZC7 2435 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 MFSD2BA6NFX1 497 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 CEBPZOSA8MTT3 80 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 SAA1P0DJI8 122 aaPredicted RBP9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 VDAC2P45880 294 aaPredicted RBP9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 LCN2P80188 198 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 PAX2Q02962 417 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 BAXQ07812 192 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 HIST2H2BCQ6DN03 193 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 OR4A16Q8NH70 328 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 TMEM170AQ8WVE7 144 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 TMEM186Q96B77 213 aa9.93□□□□□ -0.82
AP003559.1-201ENST00000540906 TNCP24821 2201 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 A0A1W2PRD5 423 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 A0A1W2PRF3 423 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 A0A1W2PRM7 423 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 FAM90A9PA6NNJ1 464 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 C15orf61A6NNL5 157 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 C15orf62A8K5M9 175 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 BUB1B-PAK6H3BSN5 160 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 H7C2Y5 167 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 RBP4P02753 201 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 SPP1P10451 314 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 ATP6V0CP27449 155 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 TAS2R30P59541 319 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 AANATQ16613 207 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 RTL8BQ17RB0 113 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 FBLN7Q53RD9 439 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 FAM71F2Q6NXP2 309 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 TGIF2LXQ8IUE1 241 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 TNFRSF14Q92956 283 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 ATP5SQ99766 215 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 TCF19Q9Y242 345 aa9.92□□□□□ -0.82
AP003559.1-201ENST00000540906 BORCS7-ASMTA0A0B4J1R7 106 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 LY6LH3BQJ8 138 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 UPK2O00526 184 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 MED6O75586 246 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 IFNA17P01571 189 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 IGLV2-23P01705 113 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 OPN1MWP04001 364 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 OPN1MW2P0DN77 364 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 OPN1MW3P0DN78 364 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 S100A1P23297 94 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 FHITP49789 147 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 SULT1A2P50226 295 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 TMEM177Q53S58 311 aa9.91□□□□□ -0.82
AP003559.1-201ENST00000540906 SP5Q6BEB4 398 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms