RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TPPPO94811 219 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 IGLV1-40P01703 118 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 SAA1P0DJI8 122 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-215ENST00000540904 CD33P20138 364 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 KIR2DS2P43631 304 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-215ENST00000540904 CRIP2P52943 208 aaPredicted RBP7.21□□□□□ -1.26
SNHG1-215ENST00000540904 BRWD1-AS2P59051 145 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 DGCR2P98153 550 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 TNXAQ16473 311 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 PRSS8Q16651 343 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 ACTBL2Q562R1 376 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 C19orf54Q5BKX5 351 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 AADACL3Q5VUY0 350 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 UNQ5815/PRO19632Q6UWF5 114 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 SPAG16Q8N0X2 631 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 TCTEX1D1Q8N7M0 179 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 RNF152Q8N8N0 203 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 TEX45Q8NA69 505 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 MINDY2Q8NBR6 621 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 LFNGQ8NES3 379 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 OR51H1Q8NH63 302 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 MCFD2Q8NI22 146 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 CASTOR1Q8WTX7 329 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 BORCS5Q969J3 196 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 MTFP1Q9UDX5 166 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 NUBP2Q9Y5Y2 271 aa7.21□□□□□ -1.26
SNHG1-215ENST00000540904 WNK1Q9H4A3 2382 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 TRRAPQ9Y4A5 3859 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 G3V4G9 280 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 GABARAPH6UMI1 98 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 ACTL6BO94805 426 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 CD3DP04234 171 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 RLN1P04808 185 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 IFNA6P05013 189 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 SLC6A1P30531 599 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 CDX1P47902 265 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-215ENST00000540904 RAB9AP51151 201 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 SSBP2P81877 361 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-215ENST00000540904 CATR1Q13166 79 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 IL18Q14116 193 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 MRGPRG-AS1Q2M3A8 158 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 DEFB136Q30KP8 78 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 PHLDA2Q53GA4 152 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 AKIRIN2Q53H80 203 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 RNASE10Q5GAN6 216 aaKnown RBP7.2□□□□□ -1.26
SNHG1-215ENST00000540904 VAX1Q5SQQ9 334 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 ETV3LQ6ZN32 361 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 SSX9Q7RTT3 188 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 CMTM1Q8IZ96 169 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 POC5Q8NA72 575 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 C4orf3Q8WVX3 66 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 DUX3Q96PT4 197 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 OR5B12Q96R08 314 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 FXYD6Q9H0Q3 95 aa7.2□□□□□ -1.26
SNHG1-215ENST00000540904 RBM38Q9H0Z9 239 aaKnown RBP7.2□□□□□ -1.26
SNHG1-215ENST00000540904 ZNF430Q9H8G1 570 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-215ENST00000540904 RSL24D1Q9UHA3 163 aaKnown RBP7.2□□□□□ -1.26
SNHG1-215ENST00000540904 VWFP04275 2813 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 PKD1L1Q8TDX9 2849 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 MSGN1A6NI15 193 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 CCL24O00175 119 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 GPR31O00270 319 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 CREBL2O60519 120 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-215ENST00000540904 PGLYRP1O75594 196 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-215ENST00000540904 OR2A4O95047 310 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 HRASP01112 189 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 APELAP0DMC3 54 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 CD40LGP29965 261 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 TNFSF8P32971 234 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 RAB25P57735 213 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 MRPS10P82664 201 aaKnown RBP7.19□□□□□ -1.26
SNHG1-215ENST00000540904 DEFA6Q01524 100 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 OXLD1Q5BKU9 147 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 PYHIN1Q6K0P9 492 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 MRPL41Q8IXM3 137 aaKnown RBP7.19□□□□□ -1.26
SNHG1-215ENST00000540904 OR5T1Q8NG75 326 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 OR5M8Q8NGP6 311 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 VSTM2AQ8TAG5 236 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 MYOZ3Q8TDC0 251 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 CD300LFQ8TDQ1 290 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 RAX2Q96IS3 184 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 RHOVQ96L33 236 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 UBE2E2Q96LR5 201 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 MS4A10Q96PG2 267 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 OR2A7Q96R45 310 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 PHB2Q99623 299 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 TINAGL1Q9GZM7 467 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-215ENST00000540904 ZNF355PQ9NSJ1 428 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 VSIG4Q9Y279 399 aa7.19□□□□□ -1.26
SNHG1-215ENST00000540904 FABP12A6NFH5 140 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 MPPED1O15442 326 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 RBFOX2O43251 390 aaKnown RBP eCLIP7.18□□□□□ -1.26
SNHG1-215ENST00000540904 KBTBD11O94819 623 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 S1PR2O95136 353 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 RAB3DO95716 219 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 HPRT1P00492 218 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 PGAM2P15259 253 aa7.18□□□□□ -1.26
SNHG1-215ENST00000540904 IGLL1P15814 213 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms