RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RTL8BQ17RB0 113 aa13.21□□□□□ -0.29
UBC-208ENST00000540700 TMEM95Q3KNT9 176 aa13.21□□□□□ -0.29
UBC-208ENST00000540700 VKORC1L1Q8N0U8 176 aa13.21□□□□□ -0.29
UBC-208ENST00000540700 OR4C13Q8NGP0 309 aa13.21□□□□□ -0.29
UBC-208ENST00000540700 BORCS5Q969J3 196 aa13.21□□□□□ -0.29
UBC-208ENST00000540700 HSPB9Q9BQS6 159 aa13.21□□□□□ -0.29
UBC-208ENST00000540700 FBXL15Q9H469 300 aa13.21□□□□□ -0.29
UBC-208ENST00000540700 BEX1Q9HBH7 125 aa13.21□□□□□ -0.29
UBC-208ENST00000540700 KMT2CQ8NEZ4 4911 aaKnown RBP13.2□□□□□ -0.3
UBC-208ENST00000540700 CRYM-AS1A6NIL9 109 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 LINC01548A6NM66 108 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 FCN1O00602 326 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 RRHO14718 337 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 RBFOX2O43251 390 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBC-208ENST00000540700 SLC25A17O43808 307 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 TSPAN9O75954 239 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 SLC6A1P30531 599 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 RAG2P55895 527 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 RBMS2Q15434 407 aaKnown RBP13.2□□□□□ -0.3
UBC-208ENST00000540700 C5orf64Q2M2E5 130 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 SP6Q3SY56 376 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 OR4S2Q8NH73 311 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 RNF5Q99942 180 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 SLC25A21Q9BQT8 299 aaPredicted RBP13.2□□□□□ -0.3
UBC-208ENST00000540700 RAB18Q9NP72 206 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 COPZ2Q9P299 210 aa13.2□□□□□ -0.3
UBC-208ENST00000540700 C14orf166Q9Y224 244 aaKnown RBP13.2□□□□□ -0.3
UBC-208ENST00000540700 SHOXO15266 292 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 CRYBA1P05813 215 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 SAA1P0DJI8 122 aaPredicted RBP13.19□□□□□ -0.3
UBC-208ENST00000540700 KIR2DS2P43631 304 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 LPAR6P43657 344 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 RPL15P61313 204 aaKnown RBP13.19□□□□□ -0.3
UBC-208ENST00000540700 NDPQ00604 133 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 TMED4Q7Z7H5 227 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 Q8N2B8 174 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 OR8H1Q8NGG4 311 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 OR4F5Q8NH21 305 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 LHFPL5Q8TAF8 219 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 OSR1Q8TAX0 266 aaPredicted RBP13.19□□□□□ -0.3
UBC-208ENST00000540700 CITED1Q99966 193 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 NAA60Q9H7X0 242 aa13.19□□□□□ -0.3
UBC-208ENST00000540700 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
UBC-208ENST00000540700 METTL1Q9UBP6 276 aaKnown RBP13.19□□□□□ -0.3
UBC-208ENST00000540700 C3orf85A0A1B0GTC6 90 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 A0A1B0GUS0 222 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 CENPXA8MT69 81 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 H0Y980 276 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 NDUFA7O95182 113 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 SPDEFO95238 335 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 OR5AC1P0C628 307 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 RPA2P15927 270 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 PJVKQ0ZLH3 352 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 LINC01006Q8NI28 216 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 TSNAXQ99598 290 aaKnown RBP13.18□□□□□ -0.3
UBC-208ENST00000540700 NPFFR1Q9GZQ6 430 aa13.18□□□□□ -0.3
UBC-208ENST00000540700 RANBP3Q9H6Z4 567 aaPredicted RBP13.18□□□□□ -0.3
UBC-208ENST00000540700 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 M0QZK8 103 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 ARPC1BO15143 372 aaKnown RBP13.17□□□□□ -0.3
UBC-208ENST00000540700 HPRT1P00492 218 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 AKR1C4P17516 323 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 ANXA7P20073 488 aaKnown RBP13.17□□□□□ -0.3
UBC-208ENST00000540700 LGALS7P47929 136 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 KRTAP10-3P60369 221 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 UBE2KP61086 200 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 DHODHQ02127 395 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 SSX9Q7RTT3 188 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 PUSL1Q8N0Z8 303 aaKnown RBP13.17□□□□□ -0.3
UBC-208ENST00000540700 CCDC71LQ8N9Z2 235 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 GLYATL2Q8WU03 294 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 CLCC1Q96S66 551 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 C20orf85Q9H1P6 137 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 C16orf95Q9H693 158 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 PLEKHA2Q9HB19 425 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 SERTAD4Q9NUC0 356 aa13.17□□□□□ -0.3
UBC-208ENST00000540700 TRAV3A0A0B4J244 114 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 HLA-DRB1P01911 266 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 TCRBP04435 133 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 IL6RP08887 468 aaPredicted RBP13.16□□□□□ -0.3
UBC-208ENST00000540700 SPNP16150 400 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 UCP1P25874 307 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 S100GP29377 79 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 TAS2R31P59538 309 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 CBX3Q13185 183 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 PPP1R1AQ13522 171 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 TMEM187Q14656 261 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 POU2AF1Q16633 256 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 C9orf152Q5JTZ5 239 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 NRARPQ7Z6K4 114 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 SLC25A42Q86VD7 318 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 POC5Q8NA72 575 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 CD300LFQ8TDQ1 290 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 SCGB3A2Q96PL1 93 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 RASL11BQ9BPW5 248 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 FAM212BQ9NTI7 297 aaPredicted RBP13.16□□□□□ -0.3
UBC-208ENST00000540700 KIAA1456Q9P272 454 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 FBXO7Q9Y3I1 522 aa13.16□□□□□ -0.3
UBC-208ENST00000540700 TRAV6A0A075B6T7 132 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms