RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 IFNA1P01562 189 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 BCL2P10415 239 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 CEBPGP53567 150 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 RPS16P62249 146 aaKnown RBP12.89□□□□□ -0.35
MKS1-204ENST00000537529 NHLH1Q02575 133 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 SLC25A48Q6ZT89 311 aaKnown RBP12.89□□□□□ -0.35
MKS1-204ENST00000537529 SSX7Q7RTT5 188 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 ZNF429Q86V71 674 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 TUBA4BQ9H853 241 aa12.89□□□□□ -0.35
MKS1-204ENST00000537529 HEYLQ9NQ87 328 aaPredicted RBP12.89□□□□□ -0.35
MKS1-204ENST00000537529 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 C17orf112F2Z3M2 114 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 ATXN7O15265 892 aaPredicted RBP12.88□□□□□ -0.35
MKS1-204ENST00000537529 IFNA10P01566 189 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 TFF3Q07654 80 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 CYB561D1Q8N8Q1 229 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 ZNF383Q8NA42 475 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 RNASE6Q93091 150 aaKnown RBP12.88□□□□□ -0.35
MKS1-204ENST00000537529 SLC39A9Q9NUM3 307 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 TMEM106BQ9NUM4 274 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 APC2O95996 2303 aa12.88□□□□□ -0.35
MKS1-204ENST00000537529 SPENQ96T58 3664 aaKnown RBP12.88□□□□□ -0.35
MKS1-204ENST00000537529 ZFP92A6NM28 416 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 C15orf61A6NNL5 157 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 E7EQL1 145 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 MMP23AO75900 390 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 DAOP14920 347 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 CTRB1P17538 263 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 VDAC2P45880 294 aaPredicted RBP12.87□□□□□ -0.35
MKS1-204ENST00000537529 HOXA1P49639 335 aaPredicted RBP12.87□□□□□ -0.35
MKS1-204ENST00000537529 FGF8P55075 233 aaPredicted RBP12.87□□□□□ -0.35
MKS1-204ENST00000537529 RPL31P62899 125 aaKnown RBP12.87□□□□□ -0.35
MKS1-204ENST00000537529 FFAR4Q5NUL3 377 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 CTRB2Q6GPI1 263 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 ACSM6Q6P461 480 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 DMRTC2Q8IXT2 367 aaPredicted RBP12.87□□□□□ -0.35
MKS1-204ENST00000537529 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 TCF19Q9Y242 345 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 ANKRD11Q6UB99 2663 aaPredicted RBP12.87□□□□□ -0.35
MKS1-204ENST00000537529 DSCAMO60469 2012 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 H3BQ15 152 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 HRASP01112 189 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 CCL17Q92583 94 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 RHOVQ96L33 236 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 MS4A5Q9H3V2 200 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 FOXA2Q9Y261 457 aaPredicted RBP12.87□□□□□ -0.35
MKS1-204ENST00000537529 RAXQ9Y2V3 346 aa12.87□□□□□ -0.35
MKS1-204ENST00000537529 DYSFO75923 2080 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 CACNA1DQ01668 2161 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 TRAV3A0A0B4J244 114 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 CTXND1A0A1B0GTU2 59 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 CD3EP07766 207 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 MDKP21741 143 aaPredicted RBP12.86□□□□□ -0.35
MKS1-204ENST00000537529 PMS2P11Q13670 270 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 HNF4GQ14541 408 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 RTL8BQ17RB0 113 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 OR4A47Q6IF82 309 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 RPP25LQ8N5L8 163 aaKnown RBP12.86□□□□□ -0.35
MKS1-204ENST00000537529 LHX4Q969G2 390 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 ZNF714Q96N38 554 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 NIPSNAP3BQ9BS92 247 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 GGACTQ9BVM4 153 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 USF3Q68DE3 2245 aa12.86□□□□□ -0.35
MKS1-204ENST00000537529 NDUFB3O43676 98 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 IGKV1D-33P01593 117 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 IGKV1-33P01594 117 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 CRYBA1P05813 215 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 FBP1P09467 338 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 FOLR2P14207 255 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 CD1BP29016 333 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 CA7P43166 264 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 LRRC10Q5BKY1 277 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 OR10G9Q8NGN4 311 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 OR10G7Q8NGN6 311 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 ZCCHC14Q8WYQ9 949 aaKnown RBP12.85□□□□□ -0.35
MKS1-204ENST00000537529 P2RX4Q99571 388 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 ACTR3CQ9C0K3 210 aaPredicted RBP12.85□□□□□ -0.35
MKS1-204ENST00000537529 VAX2Q9UIW0 290 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 WDR83OSQ9Y284 106 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 SOX15O60248 233 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 MT-ND4LP03901 98 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 DSPP15924 2871 aaKnown RBP12.85□□□□□ -0.35
MKS1-204ENST00000537529 APOBEC3AP31941 199 aaPredicted RBP12.85□□□□□ -0.35
MKS1-204ENST00000537529 RAB11AP62491 216 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 EFNB3Q15768 340 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 RBMS3Q6XE24 437 aaKnown RBP12.85□□□□□ -0.35
MKS1-204ENST00000537529 NEUROG1Q92886 237 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 HIST1H2BAQ96A08 127 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 RAB39BQ96DA2 213 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 ENY2Q9NPA8 101 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 SLC35D1Q9NTN3 355 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 TMEM14BQ9NUH8 114 aa12.85□□□□□ -0.35
MKS1-204ENST00000537529 TANC2Q9HCD6 1990 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 B9A039 149 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 KLRB1Q12918 225 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 SLC35E3Q7Z769 313 aa12.84□□□□□ -0.35
MKS1-204ENST00000537529 H1FXQ92522 213 aaKnown RBP12.84□□□□□ -0.35
MKS1-204ENST00000537529 TVP23CQ96ET8 276 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms