RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 NAP1L6A6NFF2 107 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 ADARB2-AS1A8MUL3 147 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 RRHO14718 337 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 IGHG2P01859 326 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 LGALS7P47929 136 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 PIGPP57054 158 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 TBC1D26Q86UD7 250 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 Q8N9W7 124 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 OR4F17Q8NGA8 305 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 CD300LFQ8TDQ1 290 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 DDB2Q92466 427 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 ZNF486Q96H40 463 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 OR4F4Q96R69 305 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 CLCC1Q96S66 551 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 RNF5Q99942 180 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 CITED2Q99967 270 aaPredicted RBP10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 FBXL15Q9H469 300 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 SLC2A9Q9NRM0 540 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 LIN7CQ9NUP9 197 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 SLC2A8Q9NY64 477 aa10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 METTL1Q9UBP6 276 aaKnown RBP10.23□□□□□ -0.77
TRAPPC4-212ENST00000533058 TEX13DA0A0J9YY54 714 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 SLC25A17O43808 307 aa10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 CTSDP07339 412 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 EIF4EBP1Q13541 118 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 PSG5Q15238 335 aa10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 SURF2Q15527 256 aaPredicted RBP10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 C5orf64Q2M2E5 130 aa10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 VMA21Q3ZAQ7 101 aa10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 TMEM177Q53S58 311 aa10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 TCTEX1D4Q5JR98 221 aa10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 C7orf50Q9BRJ6 194 aaKnown RBP10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 PLSCR3Q9NRY6 295 aa10.22□□□□□ -0.77
TRAPPC4-212ENST00000533058 MPPED1O15442 326 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 RAMP3O60896 148 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 SPDEFO95238 335 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 HRASP01112 189 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 F2RP25116 425 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 CCR6P51684 374 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 RND3P61587 244 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 LIN54Q6MZP7 749 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 SSX9Q7RTT3 188 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 TMED4Q7Z7H5 227 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 NPBQ8NG41 125 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 OSR1Q8TAX0 266 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 ABHD5Q8WTS1 349 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 CHPT1Q8WUD6 406 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 MRGPRFQ96AM1 343 aa10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 TSSC4Q9Y5U2 329 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC4-212ENST00000533058 NOTCH1P46531 2555 aa10.21□□□□□ -0.78
TRAPPC4-212ENST00000533058 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 LYRM1O43325 122 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 WIPF1O43516 503 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 UPK1BO75841 260 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 NDUFA3O95167 84 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 SERPINE2P07093 398 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 AKR1C4P17516 323 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 LPAR6P43657 344 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 ERVK-16P61578 105 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 GNB1P62873 340 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 DEFA6Q01524 100 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 NSUN5P1Q3KNT7 163 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 HIST2H2BDQ6DRA6 164 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 MZT2BQ6NZ67 158 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 SLC35E3Q7Z769 313 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 FOXRED2Q8IWF2 684 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 VKORC1L1Q8N0U8 176 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 FAM71E2Q8N5Q1 922 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 COMMD1Q8N668 190 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 WFDC9Q8NEX5 89 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 SLC25A21Q9BQT8 299 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 AIFM2Q9BRQ8 373 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 ZNF580Q9UK33 172 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 GPR132Q9UNW8 380 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 VSIG4Q9Y279 399 aa10.2□□□□□ -0.78
TRAPPC4-212ENST00000533058 C3orf85A0A1B0GTC6 90 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 TCRBV4S1A1TA0A5B7 111 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 PSMB11A5LHX3 300 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 SRRM4A7MD48 611 aaKnown RBP10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 AP4M1O00189 453 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 KCNAB3O43448 404 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 S1PR2O95136 353 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 CNIH1O95406 144 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 HPRT1P00492 218 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 IGLV2-23P01705 113 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 SAA1P0DJI8 122 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 RPA2P15927 270 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 UBE2KP61086 200 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 RBMS2Q15434 407 aaKnown RBP10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 TRIM16LQ309B1 348 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 SGPP2Q8IWX5 399 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 TCTEX1D1Q8N7M0 179 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 DMBX1Q8NFW5 382 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 R3HDM4Q96D70 268 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 TSC22D3Q99576 134 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 RTBDNQ9BSG5 229 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 GON7Q9BXV9 100 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 C5orf66Q9H5L9 145 aa10.19□□□□□ -0.78
TRAPPC4-212ENST00000533058 PARP11Q9NR21 331 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms