RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SNAPC3Q92966 411 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 CITED4Q96RK1 184 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 ZNF430Q9H8G1 570 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-205ENST00000531042 AKIP1Q9NQ31 210 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 SIGLEC8Q9NYZ4 499 aa12.02□□□□□ -0.49
CPSF1-205ENST00000531042 DYNC2H1Q8NCM8 4307 aaKnown RBP12.01□□□□□ -0.49
CPSF1-205ENST00000531042 TRBV9A0A0B4J1U6 114 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 FAM223BA6NKX1 122 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 CREBL2O60519 120 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-205ENST00000531042 SLC22A5O76082 557 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 IGLV2-14P01704 120 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 PRH1P02810 166 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 RHOGP84095 191 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 ZNF45Q02386 682 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 RPEL1Q2QD12 228 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 CNIH2Q6PI25 160 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 KCTD9Q7L273 389 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 TPRA1Q86W33 373 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 FAM223AQ8IWN6 122 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 MMD2Q8IY49 270 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 SPARTQ8N0X7 666 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 NUDCD2Q8WVJ2 157 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 THAP7Q9BT49 309 aaPredicted RBP12.01□□□□□ -0.49
CPSF1-205ENST00000531042 DCUN1D5Q9BTE7 237 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 RBMX2Q9Y388 322 aaKnown RBP12.01□□□□□ -0.49
CPSF1-205ENST00000531042 PRELID3BQ9Y3B1 194 aa12.01□□□□□ -0.49
CPSF1-205ENST00000531042 CSMD3Q7Z407 3707 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 IGKV1D-13A0A0B4J2D9 117 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 TMEM235A6NFC5 223 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 TUSC2O75896 110 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 ACTL6BO94805 426 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 OR2A4O95047 310 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 IGKV1-13P0DP09 117 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 LYL1P12980 280 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 CD36P16671 472 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 PSMB9P28065 219 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 RPL30P62888 115 aaKnown RBP12□□□□□ -0.49
CPSF1-205ENST00000531042 ATP5G2Q06055 141 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 LCN12Q6JVE5 192 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 TTC9CQ8N5M4 171 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 SPIN2AQ99865 258 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 SPIN2BQ9BPZ2 258 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 DAPK2Q9UIK4 370 aa12□□□□□ -0.49
CPSF1-205ENST00000531042 MRPS7Q9Y2R9 242 aaKnown RBP12□□□□□ -0.49
CPSF1-205ENST00000531042 RYR2Q92736 4967 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 BMPR1BO00238 502 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 SSX5O60225 188 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 SCGNO76038 276 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 MECP2P51608 486 aaKnown RBP11.99□□□□□ -0.49
CPSF1-205ENST00000531042 GNG2P59768 71 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 EXOSC2Q13868 293 aaKnown RBP11.99□□□□□ -0.49
CPSF1-205ENST00000531042 OR2B11Q5JQS5 317 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 C10orf55Q5SWW7 151 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 Q8N402 240 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 HSD17B10Q99714 261 aaKnown RBP11.99□□□□□ -0.49
CPSF1-205ENST00000531042 OR51E2Q9H255 320 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 PEMTQ9UBM1 199 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 ANXA10Q9UJ72 324 aa11.99□□□□□ -0.49
CPSF1-205ENST00000531042 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.98□□□□□ -0.49
CPSF1-205ENST00000531042 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 EIF4EBP1Q13541 118 aaPredicted RBP11.98□□□□□ -0.49
CPSF1-205ENST00000531042 SFXN4Q6P4A7 337 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 VKORC1L1Q8N0U8 176 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 NECAP1Q8NC96 275 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 OR4S2Q8NH73 311 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 LGALS14Q8TCE9 139 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 FCGR1BQ92637 280 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 EDA2RQ9HAV5 297 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 SSR3Q9UNL2 185 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 TENM2Q9NT68 2774 aa11.98□□□□□ -0.49
CPSF1-205ENST00000531042 LYSTQ99698 3801 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 TEX22C9J3V5 150 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 AIREO43918 545 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 BRWD1-AS2P59051 145 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 HAGHQ16775 308 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 ADAMTSL5Q6ZMM2 481 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 SLC25A42Q86VD7 318 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 MFSD4AQ8N468 514 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 OR2K2Q8NGT1 345 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 TCTEX1D2Q8WW35 142 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 OR2A7Q96R45 310 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 PALMDQ9NP74 551 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 RHBDL2Q9NX52 303 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 SPATA2Q9UM82 520 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 ZNF257Q9Y2Q1 563 aa11.97□□□□□ -0.49
CPSF1-205ENST00000531042 STARD9Q9P2P6 4700 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 HMX3A6NHT5 357 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 E7EUB6 86 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 OR2J3O76001 311 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 KBTBD11O94819 623 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 IL6RP08887 468 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-205ENST00000531042 SDC2P34741 201 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 C15orf32Q32M92 178 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 PUSL1Q8N0Z8 303 aaKnown RBP11.96□□□□□ -0.49
CPSF1-205ENST00000531042 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 KCTD12Q96CX2 325 aaKnown RBP11.96□□□□□ -0.49
CPSF1-205ENST00000531042 SPATA25Q9BR10 227 aa11.96□□□□□ -0.49
CPSF1-205ENST00000531042 YTHDF1Q9BYJ9 559 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms