RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TRGV3P03979 118 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 SLURP1P55000 103 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 PJVKQ0ZLH3 352 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 MRGPRG-AS1Q2M3A8 158 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 VMA21Q3ZAQ7 101 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 KCTD21Q4G0X4 260 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 ANKRD13BQ86YJ7 626 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 GRPEL2Q8TAA5 225 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 CASTOR1Q8WTX7 329 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 LINC00476Q8WZB0 136 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 ELOVL1Q9BW60 279 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 TUBA4BQ9H853 241 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 RANGRFQ9HD47 186 aaPredicted RBP8.05□□□□□ -1.12
CPSF1-203ENST00000527916 ANXA10Q9UJ72 324 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 ETV7Q9Y603 341 aa8.05□□□□□ -1.12
CPSF1-203ENST00000527916 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 TMEM235A6NFC5 223 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 SSX5O60225 188 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 TUSC2O75896 110 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 LY6G6CO95867 125 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 CD36P16671 472 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 ZP3P21754 424 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 AADACP22760 399 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 GNG2P59768 71 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 PRSS8Q16651 343 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 OR5T1Q8NG75 326 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 LGALS14Q8TCE9 139 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 NUDCD2Q8WVJ2 157 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 USMG5Q96IX5 58 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 HSD17B10Q99714 261 aaKnown RBP8.04□□□□□ -1.12
CPSF1-203ENST00000527916 TINAGL1Q9GZM7 467 aaPredicted RBP8.04□□□□□ -1.12
CPSF1-203ENST00000527916 ZNF355PQ9NSJ1 428 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 RHBDL2Q9NX52 303 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 RBMX2Q9Y388 322 aaKnown RBP8.04□□□□□ -1.12
CPSF1-203ENST00000527916 PRELID3BQ9Y3B1 194 aa8.04□□□□□ -1.12
CPSF1-203ENST00000527916 HECTD4Q9Y4D8 3996 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 C13orf42A0A1B0GVH6 325 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 MSGN1A6NI15 193 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 CREBL2O60519 120 aaPredicted RBP8.03□□□□□ -1.12
CPSF1-203ENST00000527916 CRYZL1O95825 349 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 IGLV2-14P01704 120 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 IGHV3-11P01762 117 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 NFYAP23511 347 aaPredicted RBP8.03□□□□□ -1.12
CPSF1-203ENST00000527916 EIF4EBP1Q13541 118 aaPredicted RBP8.03□□□□□ -1.12
CPSF1-203ENST00000527916 CDK10Q15131 360 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 MSMO1Q15800 293 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 ZNF343Q6P1L6 599 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 CROCCP3Q8IVE0 287 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 RSRP1Q9BUV0 290 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 SPATA2Q9UM82 520 aa8.03□□□□□ -1.12
CPSF1-203ENST00000527916 MRPS7Q9Y2R9 242 aaKnown RBP8.03□□□□□ -1.12
CPSF1-203ENST00000527916 TRAV18A0A075B6X5 111 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 IGKV1D-13A0A0B4J2D9 117 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 LOC100506127A0A0U1RQW1 187 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 FCGR3BO75015 233 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 IGLV1-51P01701 117 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 CLEC2LP0C7M8 214 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 IGKV1-13P0DP09 117 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 MXD1Q05195 221 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 KLF5Q13887 457 aaPredicted RBP8.02□□□□□ -1.13
CPSF1-203ENST00000527916 TIMM50Q3ZCQ8 353 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 IDNKQ5T6J7 187 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 ZNF66Q6ZN08 573 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 KCTD9Q7L273 389 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 GTSCR1Q86UQ5 136 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 HOGA1Q86XE5 327 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 MMD2Q8IY49 270 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 ADAD2Q8NCV1 583 aaKnown RBP8.02□□□□□ -1.13
CPSF1-203ENST00000527916 OR5H6Q8NGV6 325 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 VSTM2AQ8TAG5 236 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 SRSF12Q8WXF0 261 aaKnown RBP8.02□□□□□ -1.13
CPSF1-203ENST00000527916 SLC25A38Q96DW6 304 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 RNF167Q9H6Y7 350 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 DIABLOQ9NR28 239 aa8.02□□□□□ -1.13
CPSF1-203ENST00000527916 PEF1Q9UBV8 284 aaKnown RBP8.02□□□□□ -1.13
CPSF1-203ENST00000527916 TRBV9A0A0B4J1U6 114 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 H0Y980 276 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 J3QRK9 145 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 ACTL6BO94805 426 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 OR9G9P0C7N8 305 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 SAA1P0DJI8 122 aaPredicted RBP8.01□□□□□ -1.13
CPSF1-203ENST00000527916 CBX5P45973 191 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 RPL30P62888 115 aaKnown RBP8.01□□□□□ -1.13
CPSF1-203ENST00000527916 NEDD8Q15843 81 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 TNXAQ16473 311 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 TATDN3Q17R31 274 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 SLC25A42Q86VD7 318 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 MFSD4AQ8N468 514 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 TTC9CQ8N5M4 171 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 ZBTB34Q8NCN2 500 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 BEST4Q8NFU0 473 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 OR4S2Q8NH73 311 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 PHB2Q99623 299 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 SPIN2AQ99865 258 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 SPIN2BQ9BPZ2 258 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 AIFM2Q9BRQ8 373 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 DCUN1D5Q9BTE7 237 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 ZNF430Q9H8G1 570 aaPredicted RBP8.01□□□□□ -1.13
CPSF1-203ENST00000527916 SIGLEC8Q9NYZ4 499 aa8.01□□□□□ -1.13
CPSF1-203ENST00000527916 FAM223BA6NKX1 122 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms