RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	COQ4	Q9Y3A0	265 aa		3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	FLNA	P21333	2647 aa	Known RBP	3.12	□□□□□ -1.91
PCM1-223	ENST00000524356	LRP4	O75096	1905 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	SON	P18583	2426 aa	Known RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	CCDC88C	Q9P219	2028 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	IGHV5-51	A0A0C4DH38	117 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356		A0A0G2JMP0	313 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	EPM2A	B3EWF7	344 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	PPP5D1	E7EU14	171 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	TSTD3	H0UI37	97 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	OR7C1	O76099	320 aa	Predicted RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	EPPIN	O95925	133 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	SOD1	P00441	154 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	IFNA1	P01562	189 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	LINC00614	P0C842	121 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	COX6B1	P14854	86 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	GABRA1	P14867	456 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	SPN	P16150	400 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	RAB3A	P20336	220 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	MIP	P30301	263 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	AGTR1	P30556	359 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	PRSS3	P35030	304 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	PHB	P35232	272 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	CTRL	P40313	264 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	OR1E2	P47887	323 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	REG1B	P48304	166 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	HIST1H3A	P68431	136 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC35A2	P78381	396 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	BTN3A2	P78410	334 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	H3F3A	P84243	136 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	FLI1	Q01543	452 aa	Predicted RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	HERPUD1	Q15011	391 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	PMVK	Q15126	192 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	RSU1	Q15404	277 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	TSN	Q15631	228 aa	Known RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	GUCA2B	Q16661	112 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	LRRC10	Q5BKY1	277 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	FBXW9	Q5XUX1	488 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	PLET1	Q6UQ28	207 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	PAMR1	Q6UXH9	720 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	CLEC19A	Q6UXS0	136 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF493	Q6ZR52	646 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	HIST2H3A	Q71DI3	136 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	TGIF2LY	Q8IUE0	185 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	MUC15	Q8N387	334 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	LINC00301	Q8NCQ3	95 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC26A10	Q8NG04	563 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	OR4M2	Q8NGB6	313 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	OR4X1	Q8NH49	305 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	OR4S2	Q8NH73	311 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	OR10D3	Q8NH80	312 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	MFSD8	Q8NHS3	518 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	CCL17	Q92583	94 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	BORCS5	Q969J3	196 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	TM4SF18	Q96CE8	201 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	CPNE2	Q96FN4	548 aa	Predicted RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	AURKB	Q96GD4	344 aa	Predicted RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	FMC1	Q96HJ9	113 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	SPACA5	Q96QH8	159 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	KIFC1	Q9BW19	673 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	POLR2J2	Q9GZM3	115 aa	Known RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	POLR2J3	Q9H1A7	115 aa	Known RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	DCSTAMP	Q9H295	470 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	ZDHHC11	Q9H8X9	412 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	BIN3	Q9NQY0	253 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	DOK5	Q9P104	306 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC23A2	Q9UGH3	650 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF223	Q9UK11	482 aa	Predicted RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	PYCARD	Q9ULZ3	195 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	NEU3	Q9UQ49	428 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	NSD1	Q96L73	2696 aa	Predicted RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	NYNRIN	Q9P2P1	1898 aa	Known RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	ANK3	Q12955	4377 aa	Known RBP	3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	CACNA1C	Q13936	2221 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	CHD5	Q8TDI0	1954 aa		3.11	□□□□□ -1.91
PCM1-223	ENST00000524356	GTF3C1	Q12789	2109 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	INTS1	Q8N201	2190 aa	Known RBP	3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	DOCK10	Q96BY6	2186 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	VPS13C	Q709C8	3753 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	IGLV8-61	A0A075B6I0	122 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	IGHV1-69D	A0A0B4J2H0	117 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	SHISA9	B4DS77	424 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	C8orf87	E5RJ46	101 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	UPK2	O00526	184 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	PSPHP1	O15172	72 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	PDCD6	O75340	191 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	KLF7	O75840	302 aa	Predicted RBP	3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	TRBV12-3	P01733	135 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	APOC1	P02654	83 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	REG1A	P05451	166 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	PAEP	P09466	180 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	SCGB1A1	P11684	91 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	ZNF30	P17039	623 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	COX7A1	P24310	79 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	ELK4	P28324	431 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	HSPA9	P38646	679 aa	Known RBP	3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	TDGF1P3	P51864	188 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	SLC18A1	P54219	525 aa		3.1	□□□□□ -1.91
PCM1-223	ENST00000524356	H2BFS	P57053	126 aa		3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms