RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ATP6V1G2O95670 118 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 MAS1LP35410 378 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 KIR2DS2P43631 304 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 RPEL1Q2QD12 228 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 ZNF773Q6PK81 442 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 ZNF66Q6ZN08 573 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 NR2C2APQ86WQ0 139 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 ZBTB34Q8NCN2 500 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 ADAD2Q8NCV1 583 aaKnown RBP11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 OR2K2Q8NGT1 345 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 C5orf30Q96GV9 206 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 RHBDL2Q9NX52 303 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 LINC00473A8K010 186 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 FCGR3BO75015 233 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 DHFRP00374 187 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 FRMD6-AS1P0C7T7 363 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 TIMM50Q3ZCQ8 353 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 LCN12Q6JVE5 192 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 CROCCP3Q8IVE0 287 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 Q8N402 240 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 NECAP1Q8NC96 275 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 BORCS5Q969J3 196 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 RCHY1Q96PM5 261 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 OR51E2Q9H255 320 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 DIABLOQ9NR28 239 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 TNCP24821 2201 aa11.05□□□□□ -0.64
HMGCS1-203ENST00000507004 IGKV1D-8A0A087WSZ0 117 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 ANKRD34BA5PLL1 514 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 TMEM235A6NFC5 223 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 HRASP01112 189 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 SAA1P0DJI8 122 aaPredicted RBP11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 NFYAP23511 347 aaPredicted RBP11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 CBX5P45973 191 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 ARPC4P59998 168 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 ATP5G2Q06055 141 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 DYRK1AQ13627 763 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 GTSCR1Q86UQ5 136 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 SBSPONQ8IVN8 264 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 LGALS14Q8TCE9 139 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 NUDCD2Q8WVJ2 157 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 OR2A7Q96R45 310 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 ZNF430Q9H8G1 570 aaPredicted RBP11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 ZNF257Q9Y2Q1 563 aa11.04□□□□□ -0.64
HMGCS1-203ENST00000507004 TRBV9A0A0B4J1U6 114 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 SNRPBP14678 240 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 SDC2P34741 201 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 RHOGP84095 191 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 LAX1Q8IWV1 398 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 BEST4Q8NFU0 473 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 OR4A5Q8NH83 315 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 TCTEX1D2Q8WW35 142 aa11.03□□□□□ -0.64
HMGCS1-203ENST00000507004 TENM3Q9P273 2699 aa11.02□□□□□ -0.64
HMGCS1-203ENST00000507004 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 DPPA5A6NC42 116 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 TRIM64CA6NLI5 447 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 RBFOX2O43251 390 aaKnown RBP eCLIP11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 KBTBD11O94819 623 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 CATR1Q13166 79 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 IDO2Q6ZQW0 420 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 HOGA1Q86XE5 327 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 MFSD4AQ8N468 514 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 MUC7Q8TAX7 377 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 TMEM167AQ8TBQ9 72 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 ELF5Q9UKW6 265 aaPredicted RBP11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 COL7A1Q02388 2944 aa11.02□□□□□ -0.65
HMGCS1-203ENST00000507004 TRAV18A0A075B6X5 111 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 NPIPB5A8MRT5 1133 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 J3QRK9 145 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 FGF2P09038 288 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 IGHV4-30-4P0DP06 118 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 HIST1H1BP16401 226 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 RPL27AP46776 148 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 EXOSC2Q13868 293 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 KCTD21Q4G0X4 260 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 PUSL1Q8N0Z8 303 aaKnown RBP11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 Q8N1Y9 231 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 CD300LFQ8TDQ1 290 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 TM2D3Q9BRN9 247 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 VCX3AQ9NNX9 186 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 AKIP1Q9NQ31 210 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 C19orf73Q9NVV2 129 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 SPATA2Q9UM82 520 aa11.01□□□□□ -0.65
HMGCS1-203ENST00000507004 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 LOC100506127A0A0U1RQW1 187 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 SSX5O60225 188 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 IGLV2-14P01704 120 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 CSN3P07498 182 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 RPL30P62888 115 aaKnown RBP11□□□□□ -0.65
HMGCS1-203ENST00000507004 MXD1Q05195 221 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 EIF4EBP1Q13541 118 aaPredicted RBP11□□□□□ -0.65
HMGCS1-203ENST00000507004 IDNKQ5T6J7 187 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 IL34Q6ZMJ4 242 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 CITED4Q96RK1 184 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 SPATA25Q9BR10 227 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms