RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 NCBP2P52298 156 aaKnown RBP eCLIP2.19□□□□□ -2.06
RBM28-207ENST00000488249 PSG7Q13046 419 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 ENDOGQ14249 297 aaKnown RBP2.19□□□□□ -2.06
RBM28-207ENST00000488249 C16orf72Q14CZ0 275 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 MMDQ15546 238 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 CCL15Q16663 113 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 ZNF181Q2M3W8 571 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 C6orf99Q4VX62 202 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 C1orf100Q5SVJ3 147 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 LDLRAD2Q5SZI1 272 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 RASL11AQ6T310 242 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 SBSNQ6UWP8 590 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 FBXW12Q6X9E4 464 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 ACP7Q6ZNF0 438 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 DNM1P46Q6ZS02 220 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 FAM19A3Q7Z5A8 133 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 TCTE3Q8IZS6 198 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 OR8I2Q8N0Y5 310 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 SLC25A45Q8N413 288 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 C9orf62Q8N4C0 152 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 KRTCAP2Q8N6L1 136 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 ZIC4Q8N9L1 334 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 OR2G3Q8NGZ4 309 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 GEMIN6Q8WXD5 167 aaKnown RBP2.19□□□□□ -2.06
RBM28-207ENST00000488249 NEURL3Q96EH8 262 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 IGF2BP2-AS1Q96M15 143 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 HSD17B10Q99714 261 aaKnown RBP2.19□□□□□ -2.06
RBM28-207ENST00000488249 OR8D2Q9GZM6 311 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 TAF9BQ9HBM6 251 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 LHX9Q9NQ69 397 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 KCNIP2Q9NS61 270 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 MARCH5Q9NX47 278 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 DPM3Q9P2X0 92 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 ZNF629Q9UEG4 869 aaPredicted RBP2.19□□□□□ -2.06
RBM28-207ENST00000488249 ANAPC10Q9UM13 185 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 MED31Q9Y3C7 131 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 UGT2A1Q9Y4X1 527 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 PCYT1BQ9Y5K3 369 aaPredicted RBP2.19□□□□□ -2.06
RBM28-207ENST00000488249 BCL9LQ86UU0 1499 aa2.19□□□□□ -2.06
RBM28-207ENST00000488249 OVOS2A0A0G2JMS6 1433 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 DCCP43146 1447 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 IGKV1-27A0A075B6S5 117 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 IGHV2-26A0A0B4J1V2 119 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 TRAV38-1A0A0B4J264 116 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 TRAV4A0A0B4J268 109 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 IGHV1-69DA0A0B4J2H0 117 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 LOC100130705A0A1B0GUX0 176 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 SPAARA0A1B0GVQ0 90 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 CIB4A0PJX0 185 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 TMEM218A2RU14 115 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 OR4C45A6NMZ5 311 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 CLDN25C9JDP6 229 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 H7BYZ3 331 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 UPK1AO00322 258 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 ISLRO14498 428 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 PSPHP1O15172 72 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 RBFOX2O43251 390 aaKnown RBP eCLIP2.18□□□□□ -2.063e-11■□□□□ 9.1
RBM28-207ENST00000488249 FABP3P05413 133 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 HLA-DQB2P05538 268 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 OR12D1P0DN82 309 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 HIST1H1BP16401 226 aaKnown RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 NTF3P20783 257 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 RPS4Y1P22090 263 aaKnown RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 IGHV1-2P23083 117 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 IL2RGP31785 369 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 POLR2IP36954 125 aaKnown RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 LPAR6P43657 344 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 P2RX1P51575 399 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 ZNF138P52744 262 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 MP68P56378 58 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 REG3AQ06141 175 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 LOXL1Q08397 574 aaPredicted RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 SLC38A11Q08AI6 406 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 ERCC8Q13216 396 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 DHRS2Q13268 280 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 KRTAP13-3Q3SY46 172 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 FBXL19-AS1Q494R0 122 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 ABCA11PQ4W5N1 156 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 Q5XG85 94 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 GLYATQ6IB77 296 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 CXCL17Q6UXB2 119 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 UNQ9165/PRO28630Q6UXU0 137 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 ZNF493Q6ZR52 646 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 HSD17B13Q7Z5P4 300 aaPredicted RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 PRNTQ86SH4 94 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 CROCCP2Q86T23 111 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 C12orf45Q8N5I9 185 aaPredicted RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 TCTEX1D1Q8N7M0 179 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 OR2T27Q8NH04 317 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 OR5K1Q8NHB7 308 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 RXFP4Q8TDU9 374 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 CARD19Q96LW7 228 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 PSMG3Q9BT73 122 aaPredicted RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 SFXN3Q9BWM7 321 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 SNHG12Q9BXW3 62 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 NKX6-2Q9C056 277 aaPredicted RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 PARP11Q9NR21 331 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 TMEM216Q9P0N5 145 aa2.18□□□□□ -2.06
RBM28-207ENST00000488249 TRMT112Q9UI30 125 aaKnown RBP2.18□□□□□ -2.06
RBM28-207ENST00000488249 MCTS1Q9ULC4 181 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms