RNA–Protein interactions for RNA: ENST00000479904.1

BARD1-208, Transcript of BRCA1 associated RING domain 1, human

TSL 4

Gene BARD1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BARD1-208	ENST00000479904	KCTD9	Q7L273	389 aa		13.88	□□□□□ -0.19
BARD1-208	ENST00000479904	SNAPC3	Q92966	411 aa		13.88	□□□□□ -0.19
BARD1-208	ENST00000479904	TXNL4B	Q9NX01	149 aa	Known RBP	13.88	□□□□□ -0.19
BARD1-208	ENST00000479904	RBMX2	Q9Y388	322 aa	Known RBP	13.88	□□□□□ -0.19
BARD1-208	ENST00000479904	OR2W1	Q9Y3N9	320 aa		13.88	□□□□□ -0.19
BARD1-208	ENST00000479904	RYR3	Q15413	4870 aa		13.88	□□□□□ -0.19
BARD1-208	ENST00000479904	IGKV1D-13	A0A0B4J2D9	117 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	IZUMO1R	A6ND01	250 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	NOTO	A8MTQ0	251 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	TUSC2	O75896	110 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	ACTL6B	O94805	426 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	OR2A4	O95047	310 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	IGKV1-13	P0DP09	117 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	PSMB9	P28065	219 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	GABARAPL2	P60520	117 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	SPIN2A	Q99865	258 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	SPIN2B	Q9BPZ2	258 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	PALMD	Q9NP74	551 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	RAB26	Q9ULW5	256 aa		13.87	□□□□□ -0.19
BARD1-208	ENST00000479904	TENM2	Q9NT68	2774 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	FAM223B	A6NKX1	122 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	BMPR1B	O00238	502 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	CREBL2	O60519	120 aa	Predicted RBP	13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	IGLV2-14	P01704	120 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	HLA-DQB1	P01920	261 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	CTXN2	P0C2S0	81 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	CD36	P16671	472 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	FGF9	P31371	208 aa	Predicted RBP	13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	ATP5G2	Q06055	141 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	UBE2U	Q5VVX9	321 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	ZFAND6	Q6FIF0	208 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	LCN12	Q6JVE5	192 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	FAM223A	Q8IWN6	122 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	MMD2	Q8IY49	270 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	VKORC1L1	Q8N0U8	176 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	THAP7	Q9BT49	309 aa	Predicted RBP	13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	GAR1	Q9NY12	217 aa	Known RBP	13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	SIGLEC8	Q9NYZ4	499 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	DAPK2	Q9UIK4	370 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	MRPS7	Q9Y2R9	242 aa	Known RBP	13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	PRELID3B	Q9Y3B1	194 aa		13.86	□□□□□ -0.19
BARD1-208	ENST00000479904	TRBV9	A0A0B4J1U6	114 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	HMX3	A6NHT5	357 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	SSX5	O60225	188 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	MRPS14	O60783	128 aa	Known RBP	13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	GNG2	P59768	71 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	HAGH	Q16775	308 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	CNIH2	Q6PI25	160 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	GTSCR1	Q86UQ5	136 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	SPART	Q8N0X7	666 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904		Q8N402	240 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	LGALS14	Q8TCE9	139 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	DCSTAMP	Q9H295	470 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	PEMT	Q9UBM1	199 aa		13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	RRP15	Q9Y3B9	282 aa	Known RBP	13.85	□□□□□ -0.19
BARD1-208	ENST00000479904	OR2J3	O76001	311 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	ADAMTSL5	Q6ZMM2	481 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	TTC9C	Q8N5M4	171 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	NECAP1	Q8NC96	275 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	TCTEX1D2	Q8WW35	142 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	OR51E2	Q9H255	320 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	TUBA4B	Q9H853	241 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	EDA2R	Q9HAV5	297 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	TAS2R8	Q9NYW2	309 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	SPATA2	Q9UM82	520 aa		13.84	□□□□□ -0.19
BARD1-208	ENST00000479904	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	SLC22A5	O76082	557 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	MECP2	P51608	486 aa	Known RBP	13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	SFXN4	Q6P4A7	337 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	C19orf35	Q6ZS72	473 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	TPRA1	Q86W33	373 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	OR4S2	Q8NH73	311 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	ISOC1	Q96CN7	298 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	GPHA2	Q96T91	129 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	HSD17B10	Q99714	261 aa	Known RBP	13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	SPATA25	Q9BR10	227 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	RHBDL2	Q9NX52	303 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	ANXA10	Q9UJ72	324 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	SSR3	Q9UNL2	185 aa		13.83	□□□□□ -0.2
BARD1-208	ENST00000479904	TEX22	C9J3V5	150 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	PPP5D1	E7EU14	171 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	SCGN	O76038	276 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	KBTBD11	O94819	623 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	BRWD1-AS2	P59051	145 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	MXD1	Q05195	221 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	C15orf32	Q32M92	178 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	FCGR1B	Q92637	280 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	FYTTD1	Q96QD9	318 aa	Known RBP	13.82	□□□□□ -0.2
BARD1-208	ENST00000479904	ZNF257	Q9Y2Q1	563 aa		13.82	□□□□□ -0.2
BARD1-208	ENST00000479904		A0A1B0GW64	132 aa		13.81	□□□□□ -0.2
BARD1-208	ENST00000479904		E7EUB6	86 aa		13.81	□□□□□ -0.2
BARD1-208	ENST00000479904	AIRE	O43918	545 aa		13.81	□□□□□ -0.2
BARD1-208	ENST00000479904	HLA-A	P01891	365 aa	Known RBP	13.81	□□□□□ -0.2
BARD1-208	ENST00000479904	IL6R	P08887	468 aa	Predicted RBP	13.81	□□□□□ -0.2
BARD1-208	ENST00000479904	CLEC2L	P0C7M8	214 aa		13.81	□□□□□ -0.2
BARD1-208	ENST00000479904	PTHLH	P12272	177 aa		13.81	□□□□□ -0.2
BARD1-208	ENST00000479904	EDN2	P20800	178 aa		13.81	□□□□□ -0.2
BARD1-208	ENST00000479904	SDC2	P34741	201 aa		13.81	□□□□□ -0.2
BARD1-208	ENST00000479904	RPL27A	P46776	148 aa	Known RBP	13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms