RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SPIN2AQ99865 258 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 SPIN2BQ9BPZ2 258 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 C6orf62Q9GZU0 229 aaPredicted RBP6.88□□□□□ -1.31
LDB1-203ENST00000461873 ALX4Q9H161 411 aaPredicted RBP6.88□□□□□ -1.31
LDB1-203ENST00000461873 COMMD3Q9UBI1 195 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 U3KQK5 164 aa6.88□□□□□ -1.31
LDB1-203ENST00000461873 IGHV4OR15-8A0A075B7B6 117 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 A0A087WW49 117 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 IGKV1-6A0A0C4DH72 117 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 H0Y980 276 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 RAB27BO00194 218 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 RGS5O15539 181 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 HPGDSO60760 199 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 DHFRP00374 187 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 UBE2KP61086 200 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 NDPQ00604 133 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 TMEM177Q53S58 311 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 FAM209BQ5JX69 171 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 SFXN4Q6P4A7 337 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 CNIH2Q6PI25 160 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 Q6ZS49 121 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 CROCCP3Q8IVE0 287 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 SGPP2Q8IWX5 399 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 MMD2Q8IY49 270 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 OR4S2Q8NH73 311 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 TCTEX1D2Q8WW35 142 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 USMG5Q96IX5 58 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 HSD17B10Q99714 261 aaKnown RBP6.87□□□□□ -1.31
LDB1-203ENST00000461873 MIXL1Q9H2W2 232 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 CCDC59Q9P031 241 aaKnown RBP6.87□□□□□ -1.31
LDB1-203ENST00000461873 PEMTQ9UBM1 199 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 KCNK7Q9Y2U2 307 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 FBXO7Q9Y3I1 522 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 OR2W1Q9Y3N9 320 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 ETV7Q9Y603 341 aa6.87□□□□□ -1.31
LDB1-203ENST00000461873 TRAV18A0A075B6X5 111 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 TMEM235A6NFC5 223 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 MSGN1A6NI15 193 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 TMEM127O75204 238 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 HRASP01112 189 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 OR9G9P0C7N8 305 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 APELAP0DMC3 54 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 GP9P14770 177 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 NFYAP23511 347 aaPredicted RBP6.86□□□□□ -1.31
LDB1-203ENST00000461873 DUTP33316 252 aaKnown RBP6.86□□□□□ -1.31
LDB1-203ENST00000461873 KIR2DS2P43631 304 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 CBX5P45973 191 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 SCAND1P57086 179 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 LINC00205P59089 165 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 ATP5G2Q06055 141 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 CATR1Q13166 79 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 C11orf87Q6NUJ2 197 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 ACSM6Q6P461 480 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 GTSCR1Q86UQ5 136 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 LAX1Q8IWV1 398 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 H1FOOQ8IZA3 346 aaPredicted RBP6.86□□□□□ -1.31
LDB1-203ENST00000461873 LGALS14Q8TCE9 139 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 NUDCD2Q8WVJ2 157 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 SNAPC3Q92966 411 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 BORCS5Q969J3 196 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 S100A16Q96FQ6 103 aaKnown RBP6.86□□□□□ -1.31
LDB1-203ENST00000461873 RHOVQ96L33 236 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 ASCL2Q99929 193 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 NXF2Q9GZY0 626 aaKnown RBP6.86□□□□□ -1.31
LDB1-203ENST00000461873 IFT46Q9NQC8 304 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 RHBDL2Q9NX52 303 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 PEF1Q9UBV8 284 aaKnown RBP6.86□□□□□ -1.31
LDB1-203ENST00000461873 ANXA10Q9UJ72 324 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 SPATA2Q9UM82 520 aa6.86□□□□□ -1.31
LDB1-203ENST00000461873 SORL1Q92673 2214 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 A0A0A6YYH2 397 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 A6NJ64 397 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 FAM223BA6NKX1 122 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 FAM25AB3EWG3 89 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 FAM25CB3EWG5 89 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 FAM25GB3EWG6 89 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 CYB5BO43169 146 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 SOX15O60248 233 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 EGR2P11161 476 aaPredicted RBP6.85□□□□□ -1.31
LDB1-203ENST00000461873 DEFA4P12838 97 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 SPNP16150 400 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 S100GP29377 79 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 TNFSF8P32971 234 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 HERV-K104P61576 105 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 KIAA0141Q14154 515 aaPredicted RBP6.85□□□□□ -1.31
LDB1-203ENST00000461873 CDK10Q15131 360 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 PRSS8Q16651 343 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 OR2B11Q5JQS5 317 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 ZNF66Q6ZN08 573 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 IDO2Q6ZQW0 420 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 FAM223AQ8IWN6 122 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 BEST4Q8NFU0 473 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 SECTM1Q8WVN6 248 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 SRSF12Q8WXF0 261 aaKnown RBP6.85□□□□□ -1.31
LDB1-203ENST00000461873 FYTTD1Q96QD9 318 aaKnown RBP6.85□□□□□ -1.31
LDB1-203ENST00000461873 TINAGL1Q9GZM7 467 aaPredicted RBP6.85□□□□□ -1.31
LDB1-203ENST00000461873 TUBA4BQ9H853 241 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 TPSG1Q9NRR2 321 aa6.85□□□□□ -1.31
LDB1-203ENST00000461873 LSM4Q9Y4Z0 139 aaKnown RBP6.85□□□□□ -1.31
LDB1-203ENST00000461873 DNAH3Q8TD57 4116 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms