RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CDK10Q15131 360 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 TNXAQ16473 311 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 OR2B11Q5JQS5 317 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 IDNKQ5T6J7 187 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 ZNF343Q6P1L6 599 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 OR6Q1Q8NGQ2 317 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 ZNF430Q9H8G1 570 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-208ENST00000452047 U3KQK5 164 aa9.56□□□□□ -0.88
CPSF4-208ENST00000452047 A0A0A6YYH2 397 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 A6NJ64 397 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 TRBV12-3P01733 135 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 OR9G9P0C7N8 305 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 KLF5Q13887 457 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-208ENST00000452047 C10orf55Q5SWW7 151 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 GVQW1Q8N7I0 195 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 BEST4Q8NFU0 473 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 ACOT12Q8WYK0 555 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 USMG5Q96IX5 58 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 OR4C12Q96R67 309 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 PHB2Q99623 299 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 HSD17B10Q99714 261 aaKnown RBP9.55□□□□□ -0.88
CPSF4-208ENST00000452047 COA4Q9NYJ1 87 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 MRPS7Q9Y2R9 242 aaKnown RBP9.55□□□□□ -0.88
CPSF4-208ENST00000452047 PRELID3BQ9Y3B1 194 aa9.55□□□□□ -0.88
CPSF4-208ENST00000452047 TRAV18A0A075B6X5 111 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 ANKRD34BA5PLL1 514 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 CREBL2O60519 120 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-208ENST00000452047 IGLV1-51P01701 117 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 PTHLHP12272 177 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 HAPLN4Q86UW8 402 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 HOGA1Q86XE5 327 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 MMD2Q8IY49 270 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 OR4S2Q8NH73 311 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 ASCL2Q99929 193 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 DCUN1D5Q9BTE7 237 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 ELOVL1Q9BW60 279 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 AUNIPQ9H7T9 357 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 NDUFA13Q9P0J0 144 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 SPATA2Q9UM82 520 aa9.54□□□□□ -0.88
CPSF4-208ENST00000452047 DNAH7Q8WXX0 4024 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 TRBV9A0A0B4J1U6 114 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 TRIM64CA6NLI5 447 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 TMEM127O75204 238 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 KBTBD11O94819 623 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 TGFBR1P36897 503 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 ARPC4P59998 168 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 ZNF45Q02386 682 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 MSMO1Q15800 293 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 IL34Q6ZMJ4 242 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 ZNF66Q6ZN08 573 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 VKORC1L1Q8N0U8 176 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 PUSL1Q8N0Z8 303 aaKnown RBP9.53□□□□□ -0.88
CPSF4-208ENST00000452047 MFSD4AQ8N468 514 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 OR9G4Q8NGQ1 327 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 OR13F1Q8NGS4 319 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 TCTEX1D2Q8WW35 142 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 SNAPC3Q92966 411 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 GPHA2Q96T91 129 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 SPIN2AQ99865 258 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 SPIN2BQ9BPZ2 258 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 AKIP1Q9NQ31 210 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 TAS2R8Q9NYW2 309 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 PEF1Q9UBV8 284 aaKnown RBP9.53□□□□□ -0.88
CPSF4-208ENST00000452047 ADAM30Q9UKF2 790 aa9.53□□□□□ -0.88
CPSF4-208ENST00000452047 A0A1B0GW64 132 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 FAM223BA6NKX1 122 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 TEX22C9J3V5 150 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 MPPED1O15442 326 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 ACTL6BO94805 426 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 PPYP01298 95 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 PRH1P02810 166 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 FRMD6-AS1P0C7T7 363 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 FCGR2CP31995 323 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 SYNJ2BPP57105 145 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 RHOGP84095 191 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 TIMM50Q3ZCQ8 353 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 FAM223AQ8IWN6 122 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 VSTM2AQ8TAG5 236 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 TMEM167AQ8TBQ9 72 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 YIPF6Q96EC8 236 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 TSC22D3Q99576 134 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 DIABLOQ9NR28 239 aa9.52□□□□□ -0.89
CPSF4-208ENST00000452047 E7EUB6 86 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 BMPR1BO00238 502 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 XRCC3O43542 346 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 OR2A4O95047 310 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 EXOSC2Q13868 293 aaKnown RBP9.51□□□□□ -0.89
CPSF4-208ENST00000452047 ANKRD13BQ86YJ7 626 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 CROCCP3Q8IVE0 287 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 Q8N1Y9 231 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 SECTM1Q8WVN6 248 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 OR2A7Q96R45 310 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 CCL28Q9NRJ3 127 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 RYR3Q15413 4870 aa9.51□□□□□ -0.89
CPSF4-208ENST00000452047 SMIM31A0A1B0GVY4 71 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 HMX3A6NHT5 357 aa9.5□□□□□ -0.89
CPSF4-208ENST00000452047 RBFOX2O43251 390 aaKnown RBP eCLIP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms