RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 RBMX2Q9Y388 322 aaKnown RBP8.45□□□□□ -1.06
SSBP3-206ENST00000420121 SMAD5-AS1Q9Y6J3 95 aa8.45□□□□□ -1.06
SSBP3-206ENST00000420121 U3KQK5 164 aa8.45□□□□□ -1.06
SSBP3-206ENST00000420121 ANKRD34BA5PLL1 514 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 MSGN1A6NI15 193 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 TRIM64CA6NLI5 447 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 SCGNO76038 276 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 LY86O95711 162 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 IGLV1-51P01701 117 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 CTXN2P0C2S0 81 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 PTHLHP12272 177 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 GP9P14770 177 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 CD36P16671 472 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 CD40LGP29965 261 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 SCAND1P57086 179 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 PITPNAQ00169 270 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 ZNF45Q02386 682 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 KLF5Q13887 457 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-206ENST00000420121 NEDD8Q15843 81 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 TNXAQ16473 311 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 VMA21Q3ZAQ7 101 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 KCTD21Q4G0X4 260 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 C10orf55Q5SWW7 151 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 ZNF343Q6P1L6 599 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 KCTD9Q7L273 389 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 GVQW1Q8N7I0 195 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 GPHA2Q96T91 129 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 ZNF430Q9H8G1 570 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-206ENST00000420121 RANGRFQ9HD47 186 aaPredicted RBP8.44□□□□□ -1.06
SSBP3-206ENST00000420121 ZNF355PQ9NSJ1 428 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 ETV7Q9Y603 341 aa8.44□□□□□ -1.06
SSBP3-206ENST00000420121 TRBV9A0A0B4J1U6 114 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 A0A0G2JLM5 398 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 LOC100506127A0A0U1RQW1 187 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 C13orf42A0A1B0GVH6 325 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 A0A1B0GW64 132 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 E7EUB6 86 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 FCGR3BO75015 233 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 AADACP22760 399 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 TGFBR1P36897 503 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 GNG2P59768 71 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 CBX3Q13185 183 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 CDK10Q15131 360 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 OR2B11Q5JQS5 317 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 SBSPONQ8IVN8 264 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 VKORC1L1Q8N0U8 176 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 Q8N1Y9 231 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 OR6Q1Q8NGQ2 317 aa8.43□□□□□ -1.06
SSBP3-206ENST00000420121 TRAV18A0A075B6X5 111 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 TEX22C9J3V5 150 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 SLC22A5O76082 557 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 PRH1P02810 166 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 OR9G9P0C7N8 305 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 ZP3P21754 424 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 IDNKQ5T6J7 187 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 HOGA1Q86XE5 327 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 PUSL1Q8N0Z8 303 aaKnown RBP8.42□□□□□ -1.06
SSBP3-206ENST00000420121 BEST4Q8NFU0 473 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 ACOT12Q8WYK0 555 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 SNAPC3Q92966 411 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 USMG5Q96IX5 58 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 OR4C12Q96R67 309 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 THAP7Q9BT49 309 aaPredicted RBP8.42□□□□□ -1.06
SSBP3-206ENST00000420121 AUNIPQ9H7T9 357 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 AKIP1Q9NQ31 210 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 COA4Q9NYJ1 87 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 PEF1Q9UBV8 284 aaKnown RBP8.42□□□□□ -1.06
SSBP3-206ENST00000420121 DMRT1Q9Y5R6 373 aa8.42□□□□□ -1.06
SSBP3-206ENST00000420121 DYNC2H1Q8NCM8 4307 aaKnown RBP8.41□□□□□ -1.06
SSBP3-206ENST00000420121 CSMD3Q7Z407 3707 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 A0A0A6YYH2 397 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 A6NJ64 397 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 IL6RP08887 468 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-206ENST00000420121 FRMD6-AS1P0C7T7 363 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 SYNJ2BPP57105 145 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 C19orf35Q6ZS72 473 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 MMD2Q8IY49 270 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 MFSD4AQ8N468 514 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 TTC9CQ8N5M4 171 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 OR9G4Q8NGQ1 327 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 TMEM167AQ8TBQ9 72 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 YIPF6Q96EC8 236 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 PHB2Q99623 299 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 HSD17B10Q99714 261 aaKnown RBP8.41□□□□□ -1.06
SSBP3-206ENST00000420121 CCL28Q9NRJ3 127 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 TAS2R8Q9NYW2 309 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 SPATA2Q9UM82 520 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 RYR3Q15413 4870 aa8.41□□□□□ -1.06
SSBP3-206ENST00000420121 HMX3A6NHT5 357 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 CGB1A6NKQ9 187 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 BMPR1BO00238 502 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 KBTBD11O94819 623 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 CSN3P07498 182 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 FCGR2CP31995 323 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 MECP2P51608 486 aaKnown RBP8.4□□□□□ -1.06
SSBP3-206ENST00000420121 RHOGP84095 191 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 MSMO1Q15800 293 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 ADAMTSL5Q6ZMM2 481 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 ZNF66Q6ZN08 573 aa8.4□□□□□ -1.06
SSBP3-206ENST00000420121 OR13F1Q8NGS4 319 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms