RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 MRPS7Q9Y2R9 242 aaKnown RBP11.09□□□□□ -0.63
MCF2L-210ENST00000409954 TRBV9A0A0B4J1U6 114 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 OR2A4O95047 310 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 CD36P16671 472 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 CASC10Q5T4H9 136 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 NR2C2APQ86WQ0 139 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 SPARTQ8N0X7 666 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 OR2K2Q8NGT1 345 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 VSTM2AQ8TAG5 236 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 CITED4Q96RK1 184 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 HSD17B10Q99714 261 aaKnown RBP11.08□□□□□ -0.64
MCF2L-210ENST00000409954 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 AIFM2Q9BRQ8 373 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 OR51E2Q9H255 320 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 Q9H521 79 aa11.08□□□□□ -0.64
MCF2L-210ENST00000409954 ELF5Q9UKW6 265 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-210ENST00000409954 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
MCF2L-210ENST00000409954 J3QRK9 145 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 FCGR3BO75015 233 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 TUSC2O75896 110 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 CSN3P07498 182 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 LYL1P12980 280 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 GNG2P59768 71 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 LCN12Q6JVE5 192 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 IDO2Q6ZQW0 420 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 Q8N402 240 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 NECAP1Q8NC96 275 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 KCTD12Q96CX2 325 aaKnown RBP11.07□□□□□ -0.64
MCF2L-210ENST00000409954 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
MCF2L-210ENST00000409954 DAPK2Q9UIK4 370 aa11.07□□□□□ -0.64
MCF2L-210ENST00000409954 KMT2CQ8NEZ4 4911 aaKnown RBP11.07□□□□□ -0.64
MCF2L-210ENST00000409954 SAA1P0DJI8 122 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-210ENST00000409954 APELAP0DMC3 54 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 NFYAP23511 347 aaPredicted RBP11.06□□□□□ -0.64
MCF2L-210ENST00000409954 PSMB9P28065 219 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 MAS1LP35410 378 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 MECP2P51608 486 aaKnown RBP11.06□□□□□ -0.64
MCF2L-210ENST00000409954 SCAND1P57086 179 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 RHOGP84095 191 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 ZNF66Q6ZN08 573 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 KCTD9Q7L273 389 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 GTSCR1Q86UQ5 136 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 OR2A7Q96R45 310 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 TUBA4BQ9H853 241 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 AKIP1Q9NQ31 210 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 ANXA10Q9UJ72 324 aa11.06□□□□□ -0.64
MCF2L-210ENST00000409954 RRP15Q9Y3B9 282 aaKnown RBP11.06□□□□□ -0.64
MCF2L-210ENST00000409954 RPL30P62888 115 aaKnown RBP11.05□□□□□ -0.64
MCF2L-210ENST00000409954 MSMO1Q15800 293 aa11.05□□□□□ -0.64
MCF2L-210ENST00000409954 MFSD4AQ8N468 514 aa11.05□□□□□ -0.64
MCF2L-210ENST00000409954 ZBTB34Q8NCN2 500 aa11.05□□□□□ -0.64
MCF2L-210ENST00000409954 OR4S2Q8NH73 311 aa11.05□□□□□ -0.64
MCF2L-210ENST00000409954 ZNF257Q9Y2Q1 563 aa11.05□□□□□ -0.64
MCF2L-210ENST00000409954 STAB2Q8WWQ8 2551 aa11.05□□□□□ -0.64
MCF2L-210ENST00000409954 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.04□□□□□ -0.64
MCF2L-210ENST00000409954 A0A0A6YYH2 397 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 TMEM235A6NFC5 223 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 A6NJ64 397 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 TMEM127O75204 238 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 RBMXL2O75526 392 aaKnown RBP11.04□□□□□ -0.64
MCF2L-210ENST00000409954 DHFRP00374 187 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 HRASP01112 189 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 IGLV2-14P01704 120 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 TRBV12-3P01733 135 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 IFNA6P05013 189 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 SFXN4Q6P4A7 337 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 TMEM167AQ8TBQ9 72 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 NUDCD2Q8WVJ2 157 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 TCTEX1D2Q8WW35 142 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 PALMDQ9NP74 551 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 SLC2A9Q9NRM0 540 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 RHBDL2Q9NX52 303 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 SPATA2Q9UM82 520 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 ETV7Q9Y603 341 aa11.04□□□□□ -0.64
MCF2L-210ENST00000409954 SMIM30A4D0T7 59 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 DPPA5A6NC42 116 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 SSX5O60225 188 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 SDC2P34741 201 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 KIR2DS2P43631 304 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 ZNF45Q02386 682 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 EXOSC2Q13868 293 aaKnown RBP11.03□□□□□ -0.64
MCF2L-210ENST00000409954 LAX1Q8IWV1 398 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 PUSL1Q8N0Z8 303 aaKnown RBP11.03□□□□□ -0.64
MCF2L-210ENST00000409954 SPATA25Q9BR10 227 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 DIABLOQ9NR28 239 aa11.03□□□□□ -0.64
MCF2L-210ENST00000409954 TRAV18A0A075B6X5 111 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 IGKV1D-13A0A0B4J2D9 117 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 NPIPB5A8MRT5 1133 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 BMPR1BO00238 502 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 GGCTO75223 188 aaKnown RBP11.02□□□□□ -0.65
MCF2L-210ENST00000409954 KBTBD11O94819 623 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 PRH1P02810 166 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 CRYGCP07315 174 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 IGKV1-13P0DP09 117 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 RPL27AP46776 148 aaKnown RBP11.02□□□□□ -0.65
MCF2L-210ENST00000409954 ARPC4P59998 168 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 DEFA5Q01523 94 aa11.02□□□□□ -0.65
MCF2L-210ENST00000409954 EIF4EBP1Q13541 118 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-210ENST00000409954 HAGHQ16775 308 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms