RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 SARAFQ96BY9 339 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 TVP23CQ96ET8 276 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 HSD17B10Q99714 261 aaKnown RBP7.91□□□□□ -1.14
TRIM39-202ENST00000376659 LSM4Q9Y4Z0 139 aaKnown RBP7.91□□□□□ -1.14
TRIM39-202ENST00000376659 B4DEV8 164 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 YIF1AO95070 293 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 OR2C1O95371 312 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 ADH4P08319 380 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 FGF8P55075 233 aaPredicted RBP7.91□□□□□ -1.14
TRIM39-202ENST00000376659 TIMM23BQ5SRD1 257 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF787Q6DD87 383 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 SPNS3Q6ZMD2 512 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 LRRC29Q8WV35 223 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 OR6C3Q9NZP0 311 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 JKAMPQ9P055 326 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 S100GP29377 79 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 TIMP3P35625 211 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 CNEP1R1Q8N9A8 125 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 GATAD1Q8WUU5 269 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 SDSLQ96GA7 329 aa7.91□□□□□ -1.14
TRIM39-202ENST00000376659 PUS1Q9Y606 427 aaKnown RBP eCLIP7.91□□□□□ -1.14
TRIM39-202ENST00000376659 TRGV8A0A0C4DH27 118 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HBG1P69891 147 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HBG2P69892 147 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 BSXQ3C1V8 233 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 MRGPRGQ86SM5 289 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF808Q8N4W9 903 aaPredicted RBP7.9□□□□□ -1.14
TRIM39-202ENST00000376659 GAFA1Q96PS6 74 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 TMEM147Q9BVK8 224 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 VAX2Q9UIW0 290 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 IGHV3-43A0A0B4J1X8 118 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 M0R036 132 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 TIMM8AO60220 97 aaPredicted RBP7.9□□□□□ -1.14
TRIM39-202ENST00000376659 CIDEAO60543 219 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BKO60814 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BJP06899 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 IGHV3-43DP0DP04 118 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HOXA5P20719 270 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BOP23527 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BBP33778 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BDP58876 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BCP62807 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST2H2BEQ16778 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 ATP6V1FQ16864 119 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 ZNF718Q3SXZ3 478 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.9□□□□□ -1.14
TRIM39-202ENST00000376659 TEX36Q5VZQ5 186 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 ABHD5Q8WTS1 349 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 RAB1CQ92928 201 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BHQ93079 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 PINX1Q96BK5 328 aaKnown RBP7.9□□□□□ -1.14
TRIM39-202ENST00000376659 SNX22Q96L94 193 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BNQ99877 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 HIST1H2BMQ99879 126 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 WDR83OSQ9Y284 106 aa7.9□□□□□ -1.14
TRIM39-202ENST00000376659 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
TRIM39-202ENST00000376659 TRAV3A0A0B4J244 114 aa7.9□□□□□ -1.15
TRIM39-202ENST00000376659 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.9□□□□□ -1.15
TRIM39-202ENST00000376659 CYB5R3P00387 301 aaPredicted RBP7.9□□□□□ -1.15
TRIM39-202ENST00000376659 HOXC12P31275 282 aa7.9□□□□□ -1.15
TRIM39-202ENST00000376659 SPANXN5Q5MJ07 72 aa7.9□□□□□ -1.15
TRIM39-202ENST00000376659 TGIF2LYQ8IUE0 185 aa7.9□□□□□ -1.15
TRIM39-202ENST00000376659 FAM122AQ96E09 287 aa7.9□□□□□ -1.15
TRIM39-202ENST00000376659 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.9□□□□□ -1.15
TRIM39-202ENST00000376659 TMEM14BQ9NUH8 114 aa7.9□□□□□ -1.15
TRIM39-202ENST00000376659 GNG13Q9P2W3 67 aa7.9□□□□□ -1.15
TRIM39-202ENST00000376659 PROCRQ9UNN8 238 aa7.9□□□□□ -1.15
TRIM39-202ENST00000376659 TRBV24-1A0A075B6N3 115 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 MAP1LC3B2A6NCE7 125 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 GFRA3O60609 400 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 KRASP01116 189 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 PFN1P07737 140 aaKnown RBP7.89□□□□□ -1.15
TRIM39-202ENST00000376659 SNRPCP09234 159 aaKnown RBP7.89□□□□□ -1.15
TRIM39-202ENST00000376659 COL8A2P25067 703 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 POU2AF1Q16633 256 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 PRSS33Q8NF86 280 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 CD300LFQ8TDQ1 290 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 CORO2AQ92828 525 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 MAP1LC3BQ9GZQ8 125 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 PIEZO2Q9H5I5 2752 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 AP4M1O00189 453 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 IFNA5P01569 189 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 TLE1Q04724 770 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 PNRC1Q12796 327 aaPredicted RBP7.89□□□□□ -1.15
TRIM39-202ENST00000376659 GAMTQ14353 236 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 RPL39P5Q59GN2 51 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 DMRTA1Q5VZB9 504 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 CYP2G1PQ6ZSU1 146 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 DUSP13Q9UII6 198 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 SPTBN2O15020 2390 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 MGST3O14880 152 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 CLDN1O95832 211 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 PAX1P15863 534 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 GLRXP35754 106 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 FABP6P51161 128 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 DEFB109BQ30KR1 87 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 CT45A1Q5HYN5 189 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 CFAP161Q6P656 301 aa7.89□□□□□ -1.15
TRIM39-202ENST00000376659 NUP37Q8NFH4 326 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms