RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SPIN2BQ9BPZ2 258 aa5.33□□□□□ -1.56
CHD6-202ENST00000373222 CABLES2Q9BTV7 478 aa5.33□□□□□ -1.56
CHD6-202ENST00000373222 OR2D2Q9H210 308 aa5.33□□□□□ -1.56
CHD6-202ENST00000373222 TMPRSS5Q9H3S3 457 aa5.33□□□□□ -1.56
CHD6-202ENST00000373222 ZDHHC11Q9H8X9 412 aa5.33□□□□□ -1.56
CHD6-202ENST00000373222 BIN3Q9NQY0 253 aa5.33□□□□□ -1.56
CHD6-202ENST00000373222 IGF2RP11717 2491 aa5.33□□□□□ -1.56
CHD6-202ENST00000373222 TANC2Q9HCD6 1990 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 VPS13CQ709C8 3753 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 C17orf98A8MV24 154 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 SYNGR2O43760 224 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 HAND1O96004 215 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 OR8U8P0C7N1 319 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 HOXA1P49639 335 aaPredicted RBP5.32□□□□□ -1.56
CHD6-202ENST00000373222 GABRA6Q16445 453 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 EIF2S3LQ2VIR3 472 aaKnown RBP5.32□□□□□ -1.56
CHD6-202ENST00000373222 LRP11Q86VZ4 500 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 C15orf54Q8N8G6 183 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 C11orf44Q8N8P7 122 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 CLDND2Q8NHS1 167 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 GATAD1Q8WUU5 269 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 CITED1Q99966 193 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 RTL8AQ9BWD3 113 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 CDH20Q9HBT6 801 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 CLN8Q9UBY8 286 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 WSB1Q9Y6I7 421 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 ABCA4P78363 2273 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 HRNRQ86YZ3 2850 aaPredicted RBP5.32□□□□□ -1.56
CHD6-202ENST00000373222 CELSR1Q9NYQ6 3014 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 TGIF2-C20orf24A0A0A6YYL0 155 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 UBE2L5PA0A1B0GUS4 154 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 OR5H1A6NKK0 313 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 LINC00473A8K010 186 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 SAP30O75446 220 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 S1PR2O95136 353 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 KIR2DL2P43627 348 aaPredicted RBP5.32□□□□□ -1.56
CHD6-202ENST00000373222 GABRA2P47869 451 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 ZNF134P52741 427 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 TAS2R30P59541 319 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 UBE2NP61088 152 aaKnown RBP5.32□□□□□ -1.56
CHD6-202ENST00000373222 RPL23AP62750 156 aaKnown RBP5.32□□□□□ -1.56
CHD6-202ENST00000373222 DLK1P80370 383 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 TCF15Q12870 199 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 OR8G1Q15617 311 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 TRIP6Q15654 476 aaKnown RBP5.32□□□□□ -1.56
CHD6-202ENST00000373222 SRSF7Q16629 238 aaKnown RBP eCLIP5.32□□□□□ -1.56
CHD6-202ENST00000373222 FAM201AQ5SY85 155 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 AKR1C8PQ5T2L2 129 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 FGFRL1Q8N441 504 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 ZNF525Q8N782 197 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 DEFB124Q8NES8 71 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 Q8WTZ3 238 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 YPEL4Q96NS1 127 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 OR4C12Q96R67 309 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 DIRC2Q96SL1 478 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 PKIBQ9C010 78 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 SLC25A31Q9H0C2 315 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 FAM234AQ9H0X4 552 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 OPN3Q9H1Y3 402 aaPredicted RBP5.32□□□□□ -1.56
CHD6-202ENST00000373222 PSENENQ9NZ42 101 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 CLCF1Q9UBD9 225 aa5.32□□□□□ -1.56
CHD6-202ENST00000373222 SPTBN4Q9H254 2564 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 TRBV6-6A0A0A6YYG2 114 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 LRP5LA4QPB2 252 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 C1orf196B1AJZ1 125 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 YIF1AO95070 293 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 HBZP02008 142 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 MT-ND4LP03901 98 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 CTXN2P0C2S0 81 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 CECR9P0C854 216 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 RD3LP0DJH9 198 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 MEOX2P50222 304 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 RAB5CP51148 216 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 RAB2AP61019 212 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 RAB5BP61020 215 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 RAB11AP62491 216 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 EDDM3AQ14507 147 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 CCDC144NLQ6NUI1 221 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 ZNF429Q86V71 674 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 STX12Q86Y82 276 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 DMRTC2Q8IXT2 367 aaPredicted RBP5.31□□□□□ -1.56
CHD6-202ENST00000373222 VKORC1L1Q8N0U8 176 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 WDR31Q8NA23 367 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 OR13A1Q8NGR1 328 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 PBDC1Q9BVG4 233 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 TREM2Q9NZC2 230 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 IGHV3OR15-7A0A075B7D8 119 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 A0A1B0GU03 582 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 ZG16O60844 167 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 CLDN1O95832 211 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 FOLR2P14207 255 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 RPS10P46783 165 aaKnown RBP5.31□□□□□ -1.56
CHD6-202ENST00000373222 B2MP61769 119 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 ZNF146Q15072 292 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 HMGN3Q15651 99 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 GFI1BQ5VTD9 330 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 FAM90A2PQ658T7 463 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 NCR3LG1Q68D85 454 aa5.31□□□□□ -1.56
CHD6-202ENST00000373222 DUX4L9Q6RFH8 374 aaPredicted RBP5.31□□□□□ -1.56
CHD6-202ENST00000373222 WDR82Q6UXN9 313 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms