RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CCL2P13500 99 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 AREGP15514 252 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 EN2P19622 333 aaPredicted RBP8.06□□□□□ -1.12
HOXA1-201ENST00000343060 CCNOP22674 350 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 CDKN1BP46527 198 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 HNRNPA3P51991 378 aaKnown RBP8.06□□□□□ -1.12
HOXA1-201ENST00000343060 EDDM3BP56851 147 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 KRTDAPP60985 99 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 ZNF146Q15072 292 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 WDR73Q6P4I2 378 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 FBXO46Q6PJ61 603 aaPredicted RBP8.06□□□□□ -1.12
HOXA1-201ENST00000343060 MMD2Q8IY49 270 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 EAF1Q96JC9 268 aaPredicted RBP8.06□□□□□ -1.12
HOXA1-201ENST00000343060 GGTLC1Q9BX51 225 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 OR2D2Q9H210 308 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 MRPS16Q9Y3D3 137 aaKnown RBP8.06□□□□□ -1.12
HOXA1-201ENST00000343060 ARL2-SNX15V9GYD0 113 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 RANBP2P49792 3224 aaKnown RBP8.06□□□□□ -1.12
HOXA1-201ENST00000343060 A8MXE2 369 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 SIRPB1O00241 398 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 IGHEP01854 428 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 LTBRP36941 435 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 CLDN18P56856 261 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 RPS16P62249 146 aaKnown RBP8.06□□□□□ -1.12
HOXA1-201ENST00000343060 SPATA46Q5T0L3 261 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 TREML4Q6UXN2 200 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 TMEM136Q6ZRR5 245 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 SMRP1Q8NCR6 262 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 ST6GALNAC3Q8NDV1 305 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 UBALD1Q8TB05 177 aa8.06□□□□□ -1.12
HOXA1-201ENST00000343060 LY6G6EA0A0G2JKS1 128 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 A0A1W2PS18 150 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 FAM90A9PA6NNJ1 464 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 SH2D1BO14796 132 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 ZNF324O75467 553 aaPredicted RBP8.05□□□□□ -1.12
HOXA1-201ENST00000343060 FRMD6-AS1P0C7T7 363 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 RAC2P15153 192 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 GCHFRP30047 84 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 PRRX1P54821 245 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 GFRA1P56159 465 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 RPL31P62899 125 aaKnown RBP8.05□□□□□ -1.12
HOXA1-201ENST00000343060 CX3CL1P78423 397 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 UBE2V1Q13404 147 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 COTL1Q14019 142 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 Q6ZN92 141 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 H2BFWTQ7Z2G1 175 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 NIT1Q86X76 327 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 KLHDC1Q8N7A1 406 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 MGST2Q99735 147 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 COX11Q9Y6N1 276 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 U3KQA8 63 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 ESPL1Q14674 2120 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 USF3Q68DE3 2245 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 MYO9BQ13459 2157 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 ZNHIT1O43257 154 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 MRPL33O75394 65 aaKnown RBP8.05□□□□□ -1.12
HOXA1-201ENST00000343060 IGHV3-9P01782 118 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 RFPL3SP0C7P2 107 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 ARR3P36575 388 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 AMTP48728 403 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 ZNF83P51522 516 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 PDLIM3Q53GG5 364 aaPredicted RBP8.05□□□□□ -1.12
HOXA1-201ENST00000343060 GUSBP11Q6P575 273 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 C19orf35Q6ZS72 473 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 WDR86Q86TI4 376 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 OR2D3Q8NGH3 330 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 OR5B3Q8NH48 314 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 TXN2Q99757 166 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 PPIAL4AQ9Y536 164 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 SDK2Q58EX2 2172 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 CABIN1Q9Y6J0 2220 aa8.05□□□□□ -1.12
HOXA1-201ENST00000343060 A0A096LPE4 126 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 IGHV2-26A0A0B4J1V2 119 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 A0A1W2PPZ6 126 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 KLF7O75840 302 aaPredicted RBP8.04□□□□□ -1.12
HOXA1-201ENST00000343060 P04436 131 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 C3orf79P0CE67 100 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 HNF1AP20823 631 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 PTTG1IPP53801 180 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 RHOBP62745 196 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 RPL19P84098 196 aaKnown RBP8.04□□□□□ -1.12
HOXA1-201ENST00000343060 WIPI1Q5MNZ9 446 aaPredicted RBP8.04□□□□□ -1.12
HOXA1-201ENST00000343060 RCHY1Q96PM5 261 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 HES4Q9HCC6 221 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 POLDIP2Q9Y2S7 368 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 LSM4Q9Y4Z0 139 aaKnown RBP8.04□□□□□ -1.12
HOXA1-201ENST00000343060 PTPRBP23467 1997 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 MED12LQ86YW9 2145 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 SPTBN5Q9NRC6 3674 aaKnown RBP8.04□□□□□ -1.12
HOXA1-201ENST00000343060 TMEM30CPA0ZSE6 113 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 C12orf77C9JDV5 145 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 TSPOP30536 169 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 IGFBP7Q16270 282 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 ZNF808Q8N4W9 903 aaPredicted RBP8.04□□□□□ -1.12
HOXA1-201ENST00000343060 APH1AQ96BI3 265 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 GALMQ96C23 342 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 FAM103A1Q9BTL3 118 aaKnown RBP8.04□□□□□ -1.12
HOXA1-201ENST00000343060 RTL8AQ9BWD3 113 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 OSTCQ9NRP0 149 aa8.04□□□□□ -1.12
HOXA1-201ENST00000343060 KMT2EQ8IZD2 1858 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms