RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PLA2G5P39877 138 aa15.55■□□□□ 0.08
SMPD1-201ENST00000342245 RPL31P62899 125 aaKnown RBP15.55■□□□□ 0.08
SMPD1-201ENST00000342245 ARF1P84077 181 aaKnown RBP15.55■□□□□ 0.08
SMPD1-201ENST00000342245 KLF5Q13887 457 aaPredicted RBP15.55■□□□□ 0.08
SMPD1-201ENST00000342245 MUC21Q5SSG8 566 aa15.55■□□□□ 0.08
SMPD1-201ENST00000342245 SFTPA2Q8IWL1 248 aa15.55■□□□□ 0.08
SMPD1-201ENST00000342245 C18orf32Q8TCD1 76 aa15.55■□□□□ 0.08
SMPD1-201ENST00000342245 TMEM70Q9BUB7 260 aa15.55■□□□□ 0.08
SMPD1-201ENST00000342245 ULBP2Q9BZM5 246 aa15.55■□□□□ 0.08
SMPD1-201ENST00000342245 COMMD5Q9GZQ3 224 aa15.55■□□□□ 0.08
SMPD1-201ENST00000342245 HS3ST3A1Q9Y663 406 aa15.55■□□□□ 0.08
SMPD1-201ENST00000342245 AREGP15514 252 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 WFDC8Q8IUA0 241 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 DNAH14Q0VDD8 3507 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 TRAV38-1A0A0B4J264 116 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 CRXO43186 299 aaPredicted RBP15.54■□□□□ 0.08
SMPD1-201ENST00000342245 FRMD6-AS1P0C7T7 363 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 ARL14EPLP0DKL9 152 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 CRYBB3P26998 211 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 OPRK1P41145 380 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 HIST1H1AQ02539 215 aaPredicted RBP15.54■□□□□ 0.08
SMPD1-201ENST00000342245 UFSP1Q6NVU6 142 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 EBLN2Q6P2I7 272 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 OR1B1Q8NGR6 318 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 WIPF2Q8TF74 440 aaPredicted RBP15.54■□□□□ 0.08
SMPD1-201ENST00000342245 KLRF1Q9NZS2 232 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 ARL2-SNX15V9GYD0 113 aa15.54■□□□□ 0.08
SMPD1-201ENST00000342245 NCOA6Q14686 2063 aaPredicted RBP15.53■□□□□ 0.08
SMPD1-201ENST00000342245 REV3LO60673 3130 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 TRAV8-6A0A0B4J262 113 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 C2orf70A6NJV1 201 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 LRRC30A6NM36 301 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 CGAP01215 116 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 SMIM17P0DL12 118 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 KRTAP27-1Q3LI81 207 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 SAP30LQ9HAJ7 183 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 VAMP5O95183 116 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 BCL3P20749 454 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 GPR6P46095 362 aaPredicted RBP15.53■□□□□ 0.08
SMPD1-201ENST00000342245 Q6ZSR6 202 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 YAF2Q8IY57 180 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 OR2D2Q9H210 308 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 IGFLR1Q9H665 355 aa15.53■□□□□ 0.08
SMPD1-201ENST00000342245 IGLV2-14P01704 120 aa15.52■□□□□ 0.08
SMPD1-201ENST00000342245 ZNF16P17020 682 aaPredicted RBP15.52■□□□□ 0.08
SMPD1-201ENST00000342245 CEACAM3P40198 252 aa15.52■□□□□ 0.08
SMPD1-201ENST00000342245 SEC11AP67812 179 aa15.52■□□□□ 0.08
SMPD1-201ENST00000342245 Q8N7P7 452 aa15.52■□□□□ 0.08
SMPD1-201ENST00000342245 SPSB4Q96A44 273 aa15.52■□□□□ 0.08
SMPD1-201ENST00000342245 PMCHL2Q9BQD1 86 aa15.52■□□□□ 0.08
SMPD1-201ENST00000342245 RPP25Q9BUL9 199 aaKnown RBP15.52■□□□□ 0.08
SMPD1-201ENST00000342245 LRRC61Q9BV99 259 aa15.52■□□□□ 0.08
SMPD1-201ENST00000342245 ZNF331Q9NQX6 463 aaPredicted RBP15.52■□□□□ 0.08
SMPD1-201ENST00000342245 PPP1R3CQ9UQK1 317 aa15.52■□□□□ 0.08
SMPD1-201ENST00000342245 PTGDSP41222 190 aa15.52■□□□□ 0.07
SMPD1-201ENST00000342245 TNFRSF4P43489 277 aa15.52■□□□□ 0.07
SMPD1-201ENST00000342245 TNXAQ16473 311 aa15.52■□□□□ 0.07
SMPD1-201ENST00000342245 RSPO4Q2I0M5 234 aaPredicted RBP15.52■□□□□ 0.07
SMPD1-201ENST00000342245 ZNF784Q8NCA9 323 aaPredicted RBP15.52■□□□□ 0.07
SMPD1-201ENST00000342245 MS4A6AQ9H2W1 248 aa15.52■□□□□ 0.07
SMPD1-201ENST00000342245 MTCH1Q9NZJ7 389 aa15.52■□□□□ 0.07
SMPD1-201ENST00000342245 C19orf25Q9UFG5 118 aaPredicted RBP15.52■□□□□ 0.07
SMPD1-201ENST00000342245 XIRP2A4UGR9 3374 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 SMIM27A0A1W2PRY6 76 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 OR4C46A6NHA9 309 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 ISLRO14498 428 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 FBLP22087 321 aaKnown RBP15.51■□□□□ 0.07
SMPD1-201ENST00000342245 GNG4P50150 75 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 RAB30Q15771 203 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 WDR74Q6RFH5 385 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-201ENST00000342245 C5orf17Q8NAS9 161 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 EXPH5Q8NEV8 1989 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 IZUMO1RA6ND01 250 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 MOB1BQ7L9L4 216 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 NEGR1Q7Z3B1 354 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 MKXQ8IYA7 352 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 LMX1AQ8TE12 382 aa15.51■□□□□ 0.07
SMPD1-201ENST00000342245 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.51■□□□□ 0.07
SMPD1-201ENST00000342245 TDRD6O60522 2096 aaKnown RBP15.5■□□□□ 0.07
SMPD1-201ENST00000342245 A6NJY4 79 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 CELA3BP08861 270 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 P0C879 139 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 DEFA4P12838 97 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 EN2P19622 333 aaPredicted RBP15.5■□□□□ 0.07
SMPD1-201ENST00000342245 USF1P22415 310 aaPredicted RBP15.5■□□□□ 0.07
SMPD1-201ENST00000342245 CA7P43166 264 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 ZBTB34Q8NCN2 500 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 TMEM45BQ96B21 275 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 AP1S3Q96PC3 154 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 PSG11Q9UQ72 335 aa15.5■□□□□ 0.07
SMPD1-201ENST00000342245 YTHDF2Q9Y5A9 579 aaKnown RBP15.5■□□□□ 0.07
SMPD1-201ENST00000342245 NPIPA3F8WFD2 350 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 TRAPPC2LH3BP13 241 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 KIR2DL1P43626 348 aaPredicted RBP15.49■□□□□ 0.07
SMPD1-201ENST00000342245 EDDM3BP56851 147 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 TMEM191AQ9H0A3 160 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 KCNS2Q9ULS6 477 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 MMP17Q9ULZ9 603 aa15.49■□□□□ 0.07
SMPD1-201ENST00000342245 GDF1P27539 372 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms