RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 TCF20Q9UGU0 1960 aaKnown RBP13.36□□□□□ -0.27
HDAC5-202ENST00000336057 CLPSP04118 112 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 SP9P0CG40 484 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 VKORC1L1Q8N0U8 176 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 LEAP2Q969E1 77 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 QTRT1Q9BXR0 403 aaKnown RBP13.36□□□□□ -0.27
HDAC5-202ENST00000336057 FNDC1Q4ZHG4 1894 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-202ENST00000336057 CDX4O14627 284 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-202ENST00000336057 FAM209BQ5JX69 171 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 ZNF385CQ66K41 422 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-202ENST00000336057 FAM166AQ6J272 317 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 PRR19A6NJB7 356 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 IFNL4K9M1U5 179 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 GRAMD2BQ96HH9 432 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 NAGKQ9UJ70 344 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 E9PQ18 207 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 SRSF3P84103 164 aaKnown RBP13.36□□□□□ -0.27
HDAC5-202ENST00000336057 C17orf82Q86X59 251 aaPredicted RBP13.36□□□□□ -0.27
HDAC5-202ENST00000336057 DOLPP1Q86YN1 238 aa13.36□□□□□ -0.27
HDAC5-202ENST00000336057 BMPR1BO00238 502 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 RTP5Q14D33 572 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 WBP1Q96G27 269 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 CNOT1A5YKK6 2376 aaKnown RBP13.35□□□□□ -0.27
HDAC5-202ENST00000336057 IGKV1D-8A0A087WSZ0 117 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 A8MWL6 223 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 SPSB4Q96A44 273 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 ZNF137PP52743 207 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 TMUB1Q9BVT8 246 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 ZNF430Q9H8G1 570 aaPredicted RBP13.35□□□□□ -0.27
HDAC5-202ENST00000336057 ACP7Q6ZNF0 438 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 NLRC5Q86WI3 1866 aa13.35□□□□□ -0.27
HDAC5-202ENST00000336057 IGHV3-72A0A0B4J1Y9 119 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 MMD2Q8IY49 270 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 SFXN3Q9BWM7 321 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 PRDM6Q9NQX0 595 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 HLA-DQA1P01909 254 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 C8orf88P0DMB2 117 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 LBHQ53QV2 105 aaPredicted RBP13.34□□□□□ -0.27
HDAC5-202ENST00000336057 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 NPCDR1Q9BY65 106 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 MRPL18Q9H0U6 180 aaKnown RBP13.34□□□□□ -0.27
HDAC5-202ENST00000336057 LNP1A1A4G5 178 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 RPLP1P05386 114 aaKnown RBP13.34□□□□□ -0.27
HDAC5-202ENST00000336057 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 GGACTQ9BVM4 153 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 DNAJC4Q9NNZ3 241 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 DMRT1Q9Y5R6 373 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 CBY3A6NI87 242 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 ZNF729A6NN14 1252 aaPredicted RBP13.34□□□□□ -0.27
HDAC5-202ENST00000336057 CORTO00230 105 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 VENTXO95231 258 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 PLAUP00749 431 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 ZNF883P0CG24 379 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 BMI1P35226 326 aa13.34□□□□□ -0.27
HDAC5-202ENST00000336057 TRBV6-7A0A0A0MS04 114 aa13.33□□□□□ -0.27
HDAC5-202ENST00000336057 IGKV1D-13A0A0B4J2D9 117 aa13.33□□□□□ -0.27
HDAC5-202ENST00000336057 ORM1P02763 201 aa13.33□□□□□ -0.27
HDAC5-202ENST00000336057 IGKV1-13P0DP09 117 aa13.33□□□□□ -0.27
HDAC5-202ENST00000336057 ZNF25P17030 456 aaPredicted RBP13.33□□□□□ -0.27
HDAC5-202ENST00000336057 DDTP30046 118 aa13.33□□□□□ -0.27
HDAC5-202ENST00000336057 RND2P52198 227 aa13.33□□□□□ -0.27
HDAC5-202ENST00000336057 GBGT1Q8N5D6 347 aa13.33□□□□□ -0.27
HDAC5-202ENST00000336057 ZDHHC16Q969W1 377 aa13.33□□□□□ -0.27
HDAC5-202ENST00000336057 MDC1Q14676 2089 aaKnown RBP13.33□□□□□ -0.28
HDAC5-202ENST00000336057 LHFPL1Q86WI0 220 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 ZNRF1Q8ND25 227 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 ZNF716A6NP11 495 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 GOSR1O95249 250 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 PRSS1P07477 247 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 TMEM30BQ3MIR4 351 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 PRNTQ86SH4 94 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 TUBA4BQ9H853 241 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 HSPB8Q9UJY1 196 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 SCN8AQ9UQD0 1980 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 CRYBB3P26998 211 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 ZNF146Q15072 292 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 CLDND2Q8NHS1 167 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 TNFRSF19Q9NS68 423 aa13.33□□□□□ -0.28
HDAC5-202ENST00000336057 C17orf98A8MV24 154 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 FHL1Q13642 323 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 CYP2G1PQ6ZSU1 146 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 STPG3Q8N7X2 389 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 SNRNP40Q96DI7 357 aaKnown RBP13.32□□□□□ -0.28
HDAC5-202ENST00000336057 F2RL2O00254 374 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 EGR1P18146 543 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 CRYGSP22914 178 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 ERVFRD-1P60508 538 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 PSG7Q13046 419 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 RPL39P5Q59GN2 51 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 CCDC144NLQ6NUI1 221 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 NABP2Q9BQ15 211 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 SCNM1Q9BWG6 230 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 FAM117AQ9C073 453 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 PGPA6NDG6 321 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 SLC25A17O43808 307 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 CLDN18P56856 261 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 TMEM97Q5BJF2 176 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 GTF2H5Q6ZYL4 71 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 SFRP2Q96HF1 295 aa13.32□□□□□ -0.28
HDAC5-202ENST00000336057 C19orf24Q9BVV8 132 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms