RNA–Protein interactions for RNA: ENST00000252085.3

PCDHGA12-201, Transcript of protocadherin gamma subfamily A, 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA12, Length 4,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12-201ENST00000252085 NEURL1O76050 574 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 UCNP55089 124 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 MRPL54Q6P161 138 aaKnown RBP10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 SNRNP200O75643 2136 aaKnown RBP10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 ESPL1Q14674 2120 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 J3QW42 95 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 M0QZ24 198 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 CXorf1O96002 111 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 CSN3P07498 182 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 S100A4P26447 101 aaKnown RBP10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 TMEM105Q8N8V8 129 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 GP6Q9HCN6 339 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 NBASA2RRP1 2371 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 BMI1P35226 326 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 MMDQ15546 238 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 KLHDC3Q9BQ90 382 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 TCF20Q9UGU0 1960 aaKnown RBP10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 PDE6DO43924 150 aa10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 KLF7O75840 302 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 GPX4P36969 197 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 ZFP36L1Q07352 338 aaKnown RBP10.84□□□□□ -0.67
PCDHGA12-201ENST00000252085 OR2J3O76001 311 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 SRP14P37108 136 aaKnown RBP10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 PTGDSP41222 190 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 TCTAP57738 103 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 C1RLQ9NZP8 487 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 CSRP2Q16527 193 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 GTF3AQ92664 365 aaKnown RBP10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 RAB37Q96AX2 223 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 COA4Q9NYJ1 87 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 CORTO00230 105 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 ID4P47928 161 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 LDLRAD2Q5SZI1 272 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 C10orf113Q5VZT2 155 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 REPIN1Q9BWE0 567 aaKnown RBP10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 C1QTNF5Q9BXJ0 243 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 PXMP4Q9Y6I8 212 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 IGHV3-21A0A0B4J1V1 117 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 IGHV3-72A0A0B4J1Y9 119 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 MSGN1A6NI15 193 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 C9orf172C9J069 976 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 WNT9BO14905 357 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 EFNA2O43921 213 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 PRSS1P07477 247 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 PLXNA3P51805 1871 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 NRN1LQ496H8 165 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 DRAM1Q8N682 238 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 FAM131CQ96AQ9 280 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 GFI1Q99684 422 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 RASL11BQ9BPW5 248 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 ZNF319Q9P2F9 582 aa10.83□□□□□ -0.68
PCDHGA12-201ENST00000252085 MT-ND6P03923 174 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 OR5R1Q8NH85 324 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 POLEQ07864 2286 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 IGKV1-9A0A0C4DH69 117 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 S1PR2O95136 353 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 WDR25Q64LD2 544 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 TMEM204Q9BSN7 226 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 DEPPQ9NTK1 212 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 FNDC1Q4ZHG4 1894 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 CACNA1HO95180 2353 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 FAM90A26D6RGX4 464 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 SRSF10O75494 262 aaKnown RBP10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 OR10S1Q8NGN2 331 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 LEAP2Q969E1 77 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 SH3BGRL3Q9H299 93 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 NCOR1P1Q9H4R4 102 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 F2RL2O00254 374 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 APCSP02743 223 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 SSTR5P35346 364 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 LGALS7P47929 136 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 WDFY1Q8IWB7 410 aa10.82□□□□□ -0.68
PCDHGA12-201ENST00000252085 PRR19A6NJB7 356 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 WNT5AP41221 380 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 RELQ04864 619 aaPredicted RBP10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 NUDT10Q8NFP7 164 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 SLC25A28Q96A46 364 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 PERPQ96FX8 193 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 MIEN1Q9BRT3 115 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 DERL1Q9BUN8 251 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 SFXN3Q9BWM7 321 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 CISD1Q9NZ45 108 aaKnown RBP10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 ZG16O60844 167 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 SMPD2O60906 423 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 CECR9P0C854 216 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 SCGB1D4Q6XE38 83 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 MRPS18CQ9Y3D5 142 aaKnown RBP10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 MPDU1O75352 247 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 GPR6P46095 362 aaPredicted RBP10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 RPL27AP46776 148 aaKnown RBP10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 LSM10Q969L4 123 aaKnown RBP10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 C2orf88Q9BSF0 95 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 RTBDNQ9BSG5 229 aaPredicted RBP10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 TMEM140Q9NV12 185 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 JPT1Q9UK76 154 aa10.81□□□□□ -0.68
PCDHGA12-201ENST00000252085 NTN3O00634 580 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms