RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 UBALD2Q8IYN6 164 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 CDX4O14627 284 aaPredicted RBP11.89□□□□□ -0.51
TARDBP-201ENST00000240185 GPX4P36969 197 aaPredicted RBP11.89□□□□□ -0.51
TARDBP-201ENST00000240185 OR2K2Q8NGT1 345 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 TRAV24A0A0B4J272 114 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A10PA6NDY2 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A18PA6NE21 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A16PA6NEW6 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A20PA6NIJ5 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A8PA6NJQ4 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A7PA6NKC0 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A22PA8MWA6 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A12PA8MX19 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A5PA8MXJ8 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A23PA8MXZ1 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A15PP0C7V4 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A13PP0C7W8 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A14PP0C7W9 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 FAM90A24PP0C7X0 464 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 PSG4Q00888 419 aa11.89□□□□□ -0.51
TARDBP-201ENST00000240185 TRAV12-3A0A0B4J271 114 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 PIN1P1O15428 100 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 UPK3AO75631 287 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 PF4V1P10720 104 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 NXPH1P58417 271 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 TBR1Q16650 682 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 LRP5O75197 1615 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 CCL8P80075 99 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 LPAR2Q9HBW0 351 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 TRBV5-7A0A0A0MS05 114 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 hCG_38984A0A1B0GV85 526 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 GPR6P46095 362 aaPredicted RBP11.88□□□□□ -0.51
TARDBP-201ENST00000240185 ZNF658BQ4V348 819 aaPredicted RBP11.88□□□□□ -0.51
TARDBP-201ENST00000240185 C1orf185Q5T7R7 199 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 NPIPB3Q92617 1050 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 TRAV30A0A087WSZ9 112 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 A0A1B0GUT8 65 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 FOXI3A8MTJ6 420 aaPredicted RBP11.88□□□□□ -0.51
TARDBP-201ENST00000240185 NPIPB4C9JG80 1138 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 RAMP1O60894 148 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 DXOO77932 396 aaKnown RBP11.88□□□□□ -0.51
TARDBP-201ENST00000240185 LIMS1P48059 325 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 FBLIM1Q8WUP2 373 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 CITED2Q99967 270 aaPredicted RBP11.88□□□□□ -0.51
TARDBP-201ENST00000240185 LHX9Q9NQ69 397 aa11.88□□□□□ -0.51
TARDBP-201ENST00000240185 DIDO1Q9BTC0 2240 aaKnown RBP11.87□□□□□ -0.51
TARDBP-201ENST00000240185 C1QCP02747 245 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 HOXC4P09017 264 aaPredicted RBP11.87□□□□□ -0.51
TARDBP-201ENST00000240185 ZP1P60852 638 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 ZNF818PQ6ZRF7 136 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 LURAP1LQ8IV03 231 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 TMEM106BQ9NUM4 274 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 NDUFA3O95167 84 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 ZP4Q12836 540 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 ACSF3Q4G176 576 aaPredicted RBP11.87□□□□□ -0.51
TARDBP-201ENST00000240185 SPSB2Q99619 263 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 TUBA4BQ9H853 241 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 DTX4Q9Y2E6 619 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 RAB9AP51151 201 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 SRSF4Q08170 494 aaKnown RBP11.87□□□□□ -0.51
TARDBP-201ENST00000240185 GAGE2BQ13066 116 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 GAGE2EQ4V326 116 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 RIPPLY2Q5TAB7 128 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 UNQ5815/PRO19632Q6UWF5 114 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 BHLHA9Q7RTU4 235 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 RNASEH2CQ8TDP1 164 aaKnown RBP11.87□□□□□ -0.51
TARDBP-201ENST00000240185 GAGE2DQ9UEU5 116 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 SF3B6Q9Y3B4 125 aaKnown RBP11.87□□□□□ -0.51
TARDBP-201ENST00000240185 A6NNC1 897 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 IGHV4-39P01824 125 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 LIFP15018 202 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 ANKRD33Q7Z3H0 272 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 SDF2L1Q9HCN8 221 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 YBX2Q9Y2T7 364 aaKnown RBP11.87□□□□□ -0.51
TARDBP-201ENST00000240185 NWD2Q9ULI1 1742 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 IGHV3-48P01763 117 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 TIMM23BQ5SRD1 257 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 FAM159AQ6UWV7 190 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 OR4X2Q8NGF9 303 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 DLL3Q9NYJ7 618 aa11.87□□□□□ -0.51
TARDBP-201ENST00000240185 TNFSF14O43557 240 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 PLAURQ03405 335 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 LAMTOR1Q6IAA8 161 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 CACNA1DQ01668 2161 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 STRCQ7RTU9 1775 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 TRAV8-4A0A0B4J246 113 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 ZNF815PA8K554 130 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 M0R381 172 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 NPFFO15130 113 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 REG1AP05451 166 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 PAX2Q02962 417 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 LRTM2Q8N967 370 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 FSCN3Q9NQT6 498 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 CCDC88CQ9P219 2028 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 UNC13CQ8NB66 2214 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 TRAV9-2A0A087WT02 112 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 P2RY6Q15077 328 aa11.86□□□□□ -0.51
TARDBP-201ENST00000240185 FAM181AQ8N9Y4 354 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms