RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 YJL043WP47053 257 aa2.21□□□□□ -2.06
snR55snR55 YIP4P53093 235 aa2.21□□□□□ -2.06
snR55snR55 IDP3P53982 420 aaKnown RBP2.21□□□□□ -2.06
snR55snR55 BSP1Q06604 576 aa2.21□□□□□ -2.06
snR55snR55 VHS3Q08438 674 aa2.21□□□□□ -2.06
snR55snR55 RPS9BP05755 195 aaKnown RBP2.2□□□□□ -2.06
snR55snR55 HMG1P12683 1054 aa2.2□□□□□ -2.06
snR55snR55 IME1P21190 360 aa2.2□□□□□ -2.06
snR55snR55 PET127P32606 800 aa2.2□□□□□ -2.06
snR55snR55 MRPL7P36519 292 aa2.2□□□□□ -2.06
snR55snR55 BEM4P39011 633 aa2.2□□□□□ -2.06
snR55snR55 OAF1P39720 1047 aaPredicted RBP2.2□□□□□ -2.06
snR55snR55 COQ6P53318 479 aa2.2□□□□□ -2.06
snR55snR55 NDD1Q08887 554 aa2.2□□□□□ -2.06
snR55snR55 HER1Q12276 1246 aa2.2□□□□□ -2.06
snR55snR55 YPR089WO13585 888 aa2.19□□□□□ -2.06
snR55snR55 YMR085WP0CF18 432 aa2.19□□□□□ -2.06
snR55snR55 SEC15P22224 910 aa2.19□□□□□ -2.06
snR55snR55 URE2P23202 354 aaKnown RBP2.19□□□□□ -2.06
snR55snR55 CNE1P27825 502 aa2.19□□□□□ -2.06
snR55snR55 APD1P38281 316 aa2.19□□□□□ -2.06
snR55snR55 PIH1P38768 344 aa2.19□□□□□ -2.06
snR55snR55 TMN3P40071 706 aa2.19□□□□□ -2.06
snR55snR55 OPT1P40897 799 aa2.19□□□□□ -2.06
snR55snR55 YFL015CP43578 164 aa2.19□□□□□ -2.06
snR55snR55 AIM14P53109 570 aa2.19□□□□□ -2.06
snR55snR55 RPS15Q01855 142 aaKnown RBP2.19□□□□□ -2.06
snR55snR55 ATG33Q06485 197 aa2.19□□□□□ -2.06
snR55snR55 YCP4P25349 247 aaKnown RBP2.18□□□□□ -2.06
snR55snR55 YAT2P40017 923 aa2.18□□□□□ -2.06
snR55snR55 THI6P41835 540 aa2.18□□□□□ -2.06
snR55snR55 EFR3Q03653 782 aaKnown RBP2.18□□□□□ -2.06
snR55snR55 VBA4Q04602 768 aaKnown RBP2.18□□□□□ -2.06
snR55snR55 YTH1Q06102 208 aaPredicted RBP2.18□□□□□ -2.06
snR55snR55 RDL1Q12305 139 aaKnown RBP2.18□□□□□ -2.06
snR55snR55 YMR084WA2P2R3 262 aa2.17□□□□□ -2.06
snR55snR55 PPE1P38796 400 aa2.17□□□□□ -2.06
snR55snR55 DSS1P39112 969 aa2.17□□□□□ -2.06
snR55snR55 YMR124WP39523 943 aaKnown RBP2.17□□□□□ -2.06
snR55snR55 YIL024CP40543 189 aa2.17□□□□□ -2.06
snR55snR55 BUD8P41698 603 aa2.17□□□□□ -2.06
snR55snR55 BUD17P53727 317 aa2.17□□□□□ -2.06
snR55snR55 TIM50Q02776 476 aa2.17□□□□□ -2.06
snR55snR55 MFM1Q02783 413 aa2.17□□□□□ -2.06
snR55snR55 NSE3Q05541 303 aa2.17□□□□□ -2.06
snR55snR55 YPS7Q06325 596 aa2.17□□□□□ -2.06
snR55snR55 YDL073WQ07454 984 aa2.17□□□□□ -2.06
snR55snR55 WHI2P12611 486 aa2.16□□□□□ -2.06
snR55snR55 GSY1P23337 708 aa2.16□□□□□ -2.06
snR55snR55 PCL2P25693 308 aa2.16□□□□□ -2.06
snR55snR55 MGM1P32266 881 aa2.16□□□□□ -2.06
snR55snR55 YKU70P32807 602 aa2.16□□□□□ -2.06
snR55snR55 ATO2P32907 282 aa2.16□□□□□ -2.06
snR55snR55 PCM1P38628 557 aaKnown RBP2.16□□□□□ -2.06
snR55snR55 DOT6P40059 670 aaKnown RBP2.16□□□□□ -2.06
snR55snR55 TDA10P42938 290 aa2.16□□□□□ -2.06
snR55snR55 SAE2P46946 345 aa2.16□□□□□ -2.06
snR55snR55 GPD1Q00055 391 aaKnown RBP2.16□□□□□ -2.06
snR55snR55 FDC1Q03034 503 aa2.16□□□□□ -2.06
snR55snR55 SPN1Q06505 410 aaPredicted RBP2.16□□□□□ -2.06
snR55snR55 SRL1Q08673 210 aa2.16□□□□□ -2.06
snR55snR55 BUD7Q08754 746 aa2.16□□□□□ -2.06
snR55snR55 CDC53Q12018 815 aaKnown RBP2.16□□□□□ -2.06
snR55snR55 YOR111WQ99210 232 aa2.16□□□□□ -2.06
snR55snR55 RNR3P21672 869 aaKnown RBP2.15□□□□□ -2.07
snR55snR55 PEX6P33760 1030 aa2.15□□□□□ -2.07
snR55snR55 YPT10P38146 199 aa2.15□□□□□ -2.07
snR55snR55 FLO5P38894 1075 aa2.15□□□□□ -2.07
snR55snR55 ATG36P46983 293 aa2.15□□□□□ -2.07
snR55snR55 LYS20P48570 428 aaKnown RBP2.15□□□□□ -2.07
snR55snR55 YGR054WP53235 642 aaKnown RBP2.15□□□□□ -2.07
snR55snR55 RPL15BP54780 204 aaPredicted RBP2.15□□□□□ -2.07
snR55snR55 TAF7Q05021 590 aa2.15□□□□□ -2.07
snR55snR55 YLR407WQ06070 228 aa2.15□□□□□ -2.07
snR55snR55 PCL8Q08966 492 aa2.15□□□□□ -2.07
snR55snR55 YEL076C-AP0CX16 216 aa2.14□□□□□ -2.07
snR55snR55 YLR464WP0CX17 216 aa2.14□□□□□ -2.07
snR55snR55 PRP22P24384 1145 aaKnown RBP2.14□□□□□ -2.07
snR55snR55 TIM23P32897 222 aa2.14□□□□□ -2.07
snR55snR55 CDS1P38221 457 aa2.14□□□□□ -2.07
snR55snR55 CRG1P38892 291 aaRIP-Chip data2.14□□□□□ -2.07not detected
snR55snR55 YEL076CP39971 216 aa2.14□□□□□ -2.07
snR55snR55 CHZ1P40019 153 aaPredicted RBP2.14□□□□□ -2.07
snR55snR55 FTR1P40088 404 aa2.14□□□□□ -2.07
snR55snR55 CFD1P40558 293 aa2.14□□□□□ -2.07
snR55snR55 ENP2P48234 707 aaKnown RBP2.14□□□□□ -2.07
snR55snR55 SAP4P53036 818 aa2.14□□□□□ -2.07
snR55snR55 SPO1P53541 631 aa2.14□□□□□ -2.07
snR55snR55 COP1P53622 1201 aaKnown RBP2.14□□□□□ -2.07
snR55snR55 MRPL1Q04599 285 aa2.14□□□□□ -2.07
snR55snR55 SCW10Q04951 389 aa2.14□□□□□ -2.07
snR55snR55 STP4Q07351 490 aa2.14□□□□□ -2.07
snR55snR55 SNA4Q07549 140 aa2.14□□□□□ -2.07
snR55snR55 YPL216WQ08964 1102 aa2.14□□□□□ -2.07
snR55snR55 STI1P15705 589 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
snR55snR55 HOP1P20050 605 aa2.13□□□□□ -2.07
snR55snR55 YJU2P28320 278 aaPredicted RBP2.13□□□□□ -2.07
snR55snR55 PRE4P30657 266 aa2.13□□□□□ -2.07
snR55snR55 PXA1P41909 870 aa2.13□□□□□ -2.07
snR55snR55 YMR210WQ03649 449 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms